Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_J07
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1201 - 11419851-11419913,11420090-11420311                       36   0.041
04_03_0380 - 15150814-15152304                                         31   1.5  
04_03_0348 + 14735581-14737071                                         31   1.5  
12_01_0349 + 2677347-2677424,2677548-2677631,2677717-2677821,267...    29   3.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  

>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 35.9 bits (79), Expect = 0.041
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = +1

Query: 529 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPAAYRDTCXPFLPS 696
           L PP          Q+WR+  PTG   + +FP G LP A     PA  R    P  PS
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPS 70


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -2

Query: 695 EGRKGXQVSR*AAGSEQESARGSFPGGNA 609
           EG KG ++ R AAG ++ +AR + PGG A
Sbjct: 444 EGEKGAEMRRRAAGWKEAAARAARPGGPA 472


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -2

Query: 695 EGRKGXQVSR*AAGSEQESARGSFPGGNA 609
           EG KG ++ R AAG ++ +AR + PGG A
Sbjct: 444 EGEKGAEMRRRAAGWKEAAARAARPGGPA 472


>12_01_0349 +
           2677347-2677424,2677548-2677631,2677717-2677821,
           2678217-2678363,2678987-2679244,2679337-2679468,
           2679550-2679570
          Length = 274

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 569 VRGGETRQDYKDTRRFPLESS-LVRSPVPTLPLTGIPVRPF-SLREAWRFLIAH 724
           VR       Y +++   L SS ++R P P LP T   ++   S+RE  +F++ H
Sbjct: 15  VRVAALGHGYTESQLAALMSSFIIRKPPPKLPFTKAAIKTLESIRELEKFIVKH 68


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 289 NESAN---ARGEAVCVLGALPLPRSLTRCAR 372
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,632,474
Number of Sequences: 37544
Number of extensions: 519841
Number of successful extensions: 1430
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)