Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_J05
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145...   215   3e-56
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353...   214   9e-56
05_07_0285 + 28982502-28982782,28982888-28982989,28983189-289840...    30   2.9  
07_01_1013 - 8593690-8595006,8595275-8595928,8595951-8596065,859...    29   3.9  
11_05_0103 - 19083663-19083856,19083962-19084169,19084239-190843...    28   9.0  

>07_01_1143 -
           10711023-10711884,10713603-10713826,10714253-10714522,
           10715071-10715175
          Length = 486

 Score =  215 bits (526), Expect = 3e-56
 Identities = 94/162 (58%), Positives = 122/162 (75%), Gaps = 2/162 (1%)
 Frame = +1

Query: 229 WEDADFPILCQTCLGDNPYIXMTKEKYGKECKICSRPFTVFRWCPGARMRFKKTEICQTC 408
           WE +DFPI+C++CLGDNPY+ M + +Y KECKIC+RPFTVFRW PG   R+KKTEICQTC
Sbjct: 14  WERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICQTC 73

Query: 409 SKLKNVCQTCLLDLEYGLPIQVRDAALKV--QDDLPRNEVNKEYYIQNLESQLSNSDPTQ 582
            KLKNVCQ CLLDLEYGLP+QVRD AL     D +PR++VN+EY+ +  + +        
Sbjct: 74  CKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAEEHDRRARAGIDYD 133

Query: 583 PTNSLKSKGSSDLLVRLAXTAPYYKRNXPHVCSFWVKGECXR 708
            +N  K++ ++D +++L  TAPYYKRN  HVCSF+V+GEC R
Sbjct: 134 SSNG-KAR-ANDTILKLQRTAPYYKRNRAHVCSFYVRGECTR 173


>06_01_0493 -
           3536207-3537056,3537603-3537826,3538234-3538503,
           3539042-3539146
          Length = 482

 Score =  214 bits (522), Expect = 9e-56
 Identities = 93/162 (57%), Positives = 123/162 (75%), Gaps = 2/162 (1%)
 Frame = +1

Query: 229 WEDADFPILCQTCLGDNPYIXMTKEKYGKECKICSRPFTVFRWCPGARMRFKKTEICQTC 408
           WE +DFPI+C++CLGDNPY+ M + +Y KECKIC+RPFTVFRW PG   R+KKTEICQTC
Sbjct: 14  WERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICQTC 73

Query: 409 SKLKNVCQTCLLDLEYGLPIQVRDAALKV--QDDLPRNEVNKEYYIQNLESQLSNSDPTQ 582
            KLKNVCQ CLLDLEYGLP+QVRD AL +   D +PR++VN+EY+ +    + + +    
Sbjct: 74  CKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEE-HDRKARAGIDY 132

Query: 583 PTNSLKSKGSSDLLVRLAXTAPYYKRNXPHVCSFWVKGECXR 708
            ++  K++  +D +++L  TAPYYKRN  HVCSF+V+GEC R
Sbjct: 133 DSSHGKAR-PNDTILKLQRTAPYYKRNRAHVCSFYVRGECTR 173


>05_07_0285 +
           28982502-28982782,28982888-28982989,28983189-28984006,
           28984594-28985050,28985203-28985242
          Length = 565

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 169 IKKGHAMATSKSTNTYNRQNWEDADFPILCQTCLGD 276
           I KG  +AT+ +TN Y RQ +++    I  Q C  D
Sbjct: 148 ITKGGILATTATTNLYRRQRYKEGMKDIQSQCCSPD 183


>07_01_1013 -
           8593690-8595006,8595275-8595928,8595951-8596065,
           8596560-8596861,8596884-8597369
          Length = 957

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 526 CLLRFEVGHPELLMQHLSLGLADHIPNPINMF 431
           C LRF  GHPEL  + L  G+ DH+     MF
Sbjct: 315 CCLRFFQGHPEL--RKLKNGMPDHLDELDRMF 344


>11_05_0103 -
           19083663-19083856,19083962-19084169,19084239-19084323,
           19084591-19084865
          Length = 253

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 261 LAQYWKIGVFPILTIVCVC*LRCSHGVSFLDIILDSTQLNLSNKTLLSHFYM 106
           + + W  G+  +L +  V  LR SHGV+    I++    N SNK+  SH  M
Sbjct: 202 ITKVWNGGLRRLLGLRPVTSLRGSHGVNVTGEIVEPEADNKSNKSSGSHGLM 253


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,635,104
Number of Sequences: 37544
Number of extensions: 405402
Number of successful extensions: 823
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)