Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_J05
         (914 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003402-1|AAH03402.1|  420|Homo sapiens RNA binding motif prote...   319   8e-87
AK001152-1|BAA91521.1|  420|Homo sapiens protein ( Homo sapiens ...   319   8e-87
U39402-1|AAC99998.1|  367|Homo sapiens 199G4 protein.                  75   3e-13

>BC003402-1|AAH03402.1|  420|Homo sapiens RNA binding motif protein
           22 protein.
          Length = 420

 Score =  319 bits (784), Expect = 8e-87
 Identities = 136/175 (77%), Positives = 155/175 (88%), Gaps = 1/175 (0%)
 Frame = +1

Query: 187 MATSKSTNTYNRQNWEDADFPILCQTCLGDNPYIXMTKEKYGKECKICSRPFTVFRWCPG 366
           MATS  +NTYNRQNWEDADFPILCQTCLG+NPYI MTKEKYGKECKIC+RPFTVFRWCPG
Sbjct: 1   MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG 60

Query: 367 ARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKVQDDLPRNEVNKEYYIQN 546
            RMRFKKTE+CQTCSKLKNVCQTCLLDLEYGLPIQVRDA L  +DD+P+++VNKEYY QN
Sbjct: 61  VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN 120

Query: 547 LESQLSNSDPTQPTNSL-KSKGSSDLLVRLAXTAPYYKRNXPHVCSFWVKGECXR 708
           +E ++SNSD T+P   L K+  +SD+L++LA T PYYKRN PH+CSFWVKGEC R
Sbjct: 121 MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKR 175


>AK001152-1|BAA91521.1|  420|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10290 fis, clone MAMMA1002385, weakly similar to
           RIBONUCLEOPROTEIN RB97D. ).
          Length = 420

 Score =  319 bits (784), Expect = 8e-87
 Identities = 136/175 (77%), Positives = 155/175 (88%), Gaps = 1/175 (0%)
 Frame = +1

Query: 187 MATSKSTNTYNRQNWEDADFPILCQTCLGDNPYIXMTKEKYGKECKICSRPFTVFRWCPG 366
           MATS  +NTYNRQNWEDADFPILCQTCLG+NPYI MTKEKYGKECKIC+RPFTVFRWCPG
Sbjct: 1   MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG 60

Query: 367 ARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKVQDDLPRNEVNKEYYIQN 546
            RMRFKKTE+CQTCSKLKNVCQTCLLDLEYGLPIQVRDA L  +DD+P+++VNKEYY QN
Sbjct: 61  VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN 120

Query: 547 LESQLSNSDPTQPTNSL-KSKGSSDLLVRLAXTAPYYKRNXPHVCSFWVKGECXR 708
           +E ++SNSD T+P   L K+  +SD+L++LA T PYYKRN PH+CSFWVKGEC R
Sbjct: 121 MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKR 175


>U39402-1|AAC99998.1|  367|Homo sapiens 199G4 protein.
          Length = 367

 Score = 75.4 bits (177), Expect = 3e-13
 Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = +1

Query: 562 SNSDPTQPTNSL-KSKGSSDLLVRLAXTAPYYKRNXPHVCSFWVKGECXR 708
           SNSD T+P   L K+  +SD+L++LA T PYYKRN PH+CSFWVKGEC R
Sbjct: 73  SNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKR 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,007,998
Number of Sequences: 237096
Number of extensions: 2400817
Number of successful extensions: 3725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3723
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)