Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_J05
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical pr...   247   7e-66
Z81485-3|CAB03977.1|  258|Caenorhabditis elegans Hypothetical pr...    32   0.50 
AF016414-6|AAG24022.1|  323|Caenorhabditis elegans Serpentine re...    29   3.5  
AF016447-8|AAG24010.1|  189|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z69384-5|CAA93419.2|  408|Caenorhabditis elegans Hypothetical
           protein T11G6.8 protein.
          Length = 408

 Score =  247 bits (605), Expect = 7e-66
 Identities = 103/178 (57%), Positives = 137/178 (76%), Gaps = 4/178 (2%)
 Frame = +1

Query: 187 MATSKST-NTYNRQNWEDADFPILCQTCLGDNPYIXMTKEKYGKECKICSRPFTVFRWCP 363
           M+ SKS+ + YNR+NWED+DFPILC+TCLG+NPY+ M K+KYG+ECKIC RPFT FRW P
Sbjct: 1   MSMSKSSYSQYNRKNWEDSDFPILCETCLGNNPYMRMMKDKYGRECKICERPFTTFRWQP 60

Query: 364 GARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKVQDDLPRNEVNKEYYIQ 543
           G   R+K TE+CQTC+K+KNVCQTC+ DLEYGLP+QVRD  L++ D++P+   N+++++Q
Sbjct: 61  GKGARYKNTELCQTCAKVKNVCQTCMFDLEYGLPVQVRDHELQIADNIPKQGANRDFFLQ 120

Query: 544 NLESQLSNSDPTQPTNSLKS---KGSSDLLVRLAXTAPYYKRNXPHVCSFWVKGECXR 708
           N+E  L   D TQP   + +   + + D L R+  T PYYKRN PH+CSF+VKGEC R
Sbjct: 121 NVERTLGQGDGTQPIAQIANNMDQAAHDRLRRMGRTQPYYKRNAPHICSFFVKGECKR 178


>Z81485-3|CAB03977.1|  258|Caenorhabditis elegans Hypothetical
           protein C49F5.3 protein.
          Length = 258

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +3

Query: 339 FHSVSMVSRSKNAFQENRNMSDLFETEKCLSNMFIGFGIWSANPSERC 482
           F SV+  S  K AF++N    DLFE E    ++   F I  ++ S+RC
Sbjct: 208 FTSVACESIRKGAFEKNETFDDLFEYETAYEDVL--FPIIQSSKSKRC 253


>AF016414-6|AAG24022.1|  323|Caenorhabditis elegans Serpentine
           receptor, class h protein211 protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 576 WIRVRQLTLQVLYVIFLVYFV 514
           W RVRQ +  +LY++ L YF+
Sbjct: 131 WKRVRQASFVILYIVALTYFI 151


>AF016447-8|AAG24010.1|  189|Caenorhabditis elegans Hypothetical
           protein C54F6.5 protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 87  YFCDLVACRNGKEVFCLIG*AALNL 161
           +FCD V CRN K   CL G + L++
Sbjct: 162 WFCDSVTCRNCKISSCLTGDSKLHV 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,581,560
Number of Sequences: 27780
Number of extensions: 392986
Number of successful extensions: 875
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)