Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_J03
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1236 + 35141404-35142731,35142753-35143089,35143228-351433...    29   6.5  
02_01_0051 - 385738-385968,386439-386864                               29   6.5  
10_01_0152 - 1754113-1754286,1754396-1754551,1755273-1756194,175...    28   8.6  

>02_05_1236 +
           35141404-35142731,35142753-35143089,35143228-35143305,
           35143395-35143703,35144449-35144572,35144620-35144789
          Length = 781

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 58  NIFDELSERQLVNFNHEVFPFLFLCCA 138
           N+FDE+  R  V+FN  +  ++  CC+
Sbjct: 153 NLFDEMPARDTVSFNTLISSYVHSCCS 179


>02_01_0051 - 385738-385968,386439-386864
          Length = 218

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 302 RFIQLKVYRLVQCNVA*WNLLPSPLSC 382
           RF Q+KVY+    NV   NLLP+P  C
Sbjct: 155 RFAQIKVYQTGPFNVEAANLLPTPGIC 181


>10_01_0152 -
           1754113-1754286,1754396-1754551,1755273-1756194,
           1756364-1756414,1757540-1757946,1758918-1759067,
           1759178-1759333,1760175-1761041
          Length = 960

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 568 LHKTTPERNKTKL*DKKFNCLSLKR*VYIC 479
           L K TPER   KL D+ F C  L R   +C
Sbjct: 901 LEKNTPERIIGKLEDRSFTCEHLTRVEVVC 930


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,704,901
Number of Sequences: 37544
Number of extensions: 247501
Number of successful extensions: 608
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)