Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_J03
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   4.9  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   8.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 349 RHVALNQTIHFQLDKPVD 296
           RH+   + + F LDKPVD
Sbjct: 638 RHIYDGRAMGFPLDKPVD 655


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 349 RHVALNQTIHFQLDKPVD 296
           RH+   + + F LDKPVD
Sbjct: 638 RHIYDGRAMGFPLDKPVD 655


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 161 PASFNIKTAQHKNKN 117
           PA+FNI T  ++N+N
Sbjct: 630 PAAFNISTTIYENQN 644


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 209 PRRRSLKKPFTPALTGPASFN 147
           PRRR   KP T  +  P + N
Sbjct: 43  PRRRKFHKPITLTIPVPQAAN 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,662
Number of Sequences: 438
Number of extensions: 3111
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)