Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I22
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0744 + 19237901-19237912,19238119-19238611,19238860-192389...    30   2.3  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    29   6.9  
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406...    28   9.1  

>04_03_0744 +
           19237901-19237912,19238119-19238611,19238860-19238928,
           19239124-19239140,19239260-19239357,19240019-19240156,
           19240710-19240899,19241175-19241307,19241505-19242442
          Length = 695

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 24  IGNSLRFDNFNIFACDNS*SYKNEILHDFRPRSAGYG 134
           +G+S  FDNF  F  +   ++KN    +F P   GYG
Sbjct: 256 VGDSCGFDNFPSFGIE---AFKNTFYFNFNPSYVGYG 289


>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
            27505576-27507522,27508478-27508946,27509898-27510079,
            27510746-27511208,27511295-27511691,27511810-27511937,
            27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
 Frame = +2

Query: 194  NGNGYE-----PIDNGAYYVDPPQGPTLLQAYPFP 283
            +GN Y      P  N AY++ PP  P     YP+P
Sbjct: 1189 HGNNYHQPPSVPPPNNAYHLQPPPHPPFPNQYPYP 1223


>08_01_0461 -
           4063614-4064375,4064439-4066017,4066041-4066086,
           4066416-4066933,4067435-4067694,4068089-4068594,
           4068667-4071319
          Length = 2107

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 196 WKRLRTYRQRCILRGPSPRPDLTSSLPLSLVLAVGSK 306
           W RLR    R +L+ P+P P ++SS  +  V+    K
Sbjct: 836 WDRLRENSFRILLQFPTPLPGISSSTSIDSVIRWAKK 872


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,135,427
Number of Sequences: 37544
Number of extensions: 202235
Number of successful extensions: 517
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)