Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I19
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778...    33   0.30 
11_06_0201 + 21178784-21179047,21179519-21180064                       31   1.6  
05_06_0216 - 26453029-26454597                                         28   8.5  
05_03_0164 - 9078814-9079908                                           28   8.5  

>09_06_0292 +
           22075647-22075691,22077394-22077507,22077602-22077841,
           22077926-22078003,22078094-22078162,22078420-22078545,
           22079108-22079188,22079272-22079460,22079597-22080434,
           22082290-22082411,22082482-22082701,22082910-22083055,
           22083260-22083566,22083886-22084136,22084294-22084533,
           22084930-22085238
          Length = 1124

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +3

Query: 189 PIFKATPPLTSRGTREWEEGR-SSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPG 365
           P  + T P+    T    E R +S +WD+    Y   P  T     +  +  PAR T   
Sbjct: 487 PTTQITNPMFQSATSYVRENRRASVVWDQEAGRYVSVPAQTRA---VPGLDLPAR-TPRF 542

Query: 366 LLGPGGDSTNYGGRLDWANKNAQA 437
           L  P G+S+N+G  L  AN ++ A
Sbjct: 543 LANPTGESSNHGKNLAPANASSSA 566


>11_06_0201 + 21178784-21179047,21179519-21180064
          Length = 269

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +3

Query: 315 FSMMTAVS*PARLTAPGLLGPGGDSTNYGGRLDWANKNAQA 437
           F    AVS PA L A  LLGPGG   +  G L  A   A A
Sbjct: 72  FPAAEAVSSPAELPATQLLGPGGGGVSPRGWLALARTRAPA 112


>05_06_0216 - 26453029-26454597
          Length = 522

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 477 SQICXRFVCLCQWQLVRSCWPSPDVHRS*CCHLRVLRALVP*AWPVS*PR 328
           + +  RF    +W +  SC PSP + RS     R+L A VP +W  S PR
Sbjct: 348 TDLIVRFTGPERWIVPSSCSPSPPLLRS---LRRLLVADVPSSWDASWPR 394


>05_03_0164 - 9078814-9079908
          Length = 364

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 25/105 (23%), Positives = 44/105 (41%)
 Frame = +3

Query: 366 LLGPGGDSTNYGGRLDWANKNAQAAIDINRQIGXRSGMTASGSGVWDLDKNTHISAGGMV 545
           ++G  G +++    LD+ +  A A +  NR+ G ++     G  +  L  N H S G   
Sbjct: 85  VVGDAGATSDGLLLLDFTDIRATARVVANRRAGAQAQAQQQGKKLTGLSFNLHNSRGDTQ 144

Query: 546 SKEFGHXRTDXGLQPXIRHEWLIVNTIPSFIEXCSXVSXPKKLLF 680
            +E     T+    P I    L+ N I   +     ++  KK +F
Sbjct: 145 ERELAGVNTN----PDITR--LVCNPISGELFRLPDINGTKKTMF 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,440,487
Number of Sequences: 37544
Number of extensions: 471748
Number of successful extensions: 1214
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)