Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_I17
(929 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 31 0.23
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 29 0.93
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 28 1.6
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 2.8
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 27 3.8
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 5.0
SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription te... 27 5.0
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 27 5.0
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 26 8.7
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 8.7
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = -3
Query: 462 LQSEVVVSGNELDEVSGHDESKVKGEVLSNNVLSVADPELVAVLHGVPSLVNDQVVDYIL 283
L ++V+ G++ +V HD E LS S P+L HGV + VN V DYI
Sbjct: 176 LDKQIVLLGDDTWDVLFHD---YLNETLSQPAFSFNVPDL----HGVDNKVNQYVFDYIK 228
Query: 282 D 280
D
Sbjct: 229 D 229
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 29.1 bits (62), Expect = 0.93
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 360 VADPELVAVLHGVPSLVNDQVVDYILDDGTPCSASR 253
V D V + H +PS+V D DYI +G ASR
Sbjct: 239 VYDSPWVDLTHSLPSVVADDAADYIPSEGFHHRASR 274
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 453 RSEARFHNQSLERKTCIRRWCRQAD*TRQLEVHYLGGRTTECTSRVHNTKYN 608
R E +F + ER+ R+W Q D R + G + RV+++++N
Sbjct: 323 RDEEQFLEK--ERRDTARKWDNQGDFIRNMRKEIYSGDSVSLADRVNSSRHN 372
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -3
Query: 483 GIGCGTELQSEVVVSGNELDEVSGHDESKVKGEVLSNNVLSVADPELVAVLHGVPSLVN 307
G CG + VV LD V G DE+ G+ LS + DP + ++H + S +N
Sbjct: 1113 GHSCGVIKEYSTVVVMGSLDGVEGSDETVSGGQRLSLDRPPTNDPASL-MIHQLISCMN 1170
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 156 DVNLASNQELEEKLYNSVLAGNYDSAVAQSLEHE 257
+VN+ S+ ELEE + A NY+ + HE
Sbjct: 10 EVNMDSSMELEESSQEPLRADNYEEIYNSLVHHE 43
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -3
Query: 471 GTELQSEVVVSGNELDEVSGHDESKVKGEVLSNNVLSVADPELVAVLHGVPSLVNDQV 298
G E++S + N+++E + ++ EVLS N + E V + +PS+ Q+
Sbjct: 477 GVEIKSNLEAKSNDVEEYDAFYKDEINCEVLSWNEQNPKASEERVVGYSLPSVNLQQI 534
>SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription
termination factor Reb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 504
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +1
Query: 274 SIIQNVVDDLIIDKRRNTMEYCYKLWVGNGQHIVRKYF 387
+II V + I+D+ + ++C ++W G +R ++
Sbjct: 247 AIISQEVHNFIMDQGWSEYQFCNQIWAGKCPKTIRMFY 284
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Frame = +3
Query: 156 DVNLASNQELEEKLYNSVLAGNYDSAVAQSLEHEKQNRGFHHPECSRRPDH----*QETE 323
D+N+ E E+ + G + EH +N HH E + DH ++ +
Sbjct: 500 DINIFEEFEEEKDNVEAQKMGYTNDDHVSQHEHTHENSQEHHHEHNHNHDHIHKYNEKCD 559
Query: 324 HHGVLLQALGRQRTAH 371
H + LQ L H
Sbjct: 560 HESISLQNLDNDHHCH 575
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 25.8 bits (54), Expect = 8.7
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = -1
Query: 803 PEXFTIARSSKASLCSRL*MKNQXVVFVLRGLEEPLLXXXXXXXXXVYKTVPIVAVSLRA 624
PE I ASL RL + VF L+ LEE LL +PIV + A
Sbjct: 140 PEKPAIIPPEVASLQDRLGAQPSEKVFSLQELEEQLLNSMTAPKPPSQPAIPIVPSEMAA 199
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 411 HDESKVKGEVLSNNVLSVADPELVAVLHGVPSL 313
HD S+ + + N++LSV DP + H VPS+
Sbjct: 516 HDLSRGNRDKIRNSILSVYDPNVSQ--HRVPSI 546
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,037,762
Number of Sequences: 5004
Number of extensions: 57495
Number of successful extensions: 180
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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