Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I17
         (929 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81517-5|CAB04212.1|  685|Caenorhabditis elegans Hypothetical pr...    33   0.22 
Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    29   6.3  

>Z81517-5|CAB04212.1|  685|Caenorhabditis elegans Hypothetical
           protein F28B1.5 protein.
          Length = 685

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = -3

Query: 552 NELPTDEFSLLVCTIAECKSFVRGIGCGTELQSEVVVSGNELDEVSGHDESKVKGEVLSN 373
           + +  D+F L++    E   F+R    GT+  S   +S     EV+GH + + +G  L+ 
Sbjct: 136 SSIEIDDFYLMLFHDKELPIFMRRFYAGTDKASPATLSDLGCREVNGHIQWEYRGSKLTE 195

Query: 372 NVLSVA 355
           N L +A
Sbjct: 196 NELFIA 201


>Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical
           protein C25F9.5 protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +3

Query: 471 HNQSLERKTCIRRWCRQAD*TRQLEVHYLGGRTTECTSRVHNTKYNQYLKMSSKT 635
           H Q L + + + RWC   + T +   H+L G   +    V      Q L + S T
Sbjct: 357 HYQKLLQLSVMHRWCLTEENTHRFSAHFLKGNNDKIGEDVVVNNIEQKLHLLSTT 411


>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -3

Query: 381 LSNNVLSVADPELVAVLHGVPSLVNDQVVDYILDDGTP 268
           L +++L+V D  L  +LHG  +  N ++V++++  G P
Sbjct: 509 LPHHILTVQDLNLNTLLHGAINSENFELVEFLIHMGAP 546


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,215,129
Number of Sequences: 27780
Number of extensions: 338637
Number of successful extensions: 1097
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)