Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I17
         (929 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   3.0  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   3.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   5.2  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   9.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 588 VHNTKYNQYLKMSSKTDCNNRDRLVY 665
           V N K   YL++ ++  C N +R  Y
Sbjct: 478 VENFKGGMYLRLKARRACMNYERFTY 503


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 588 VHNTKYNQYLKMSSKTDCNNRDRLVY 665
           V N K   YL++ ++  C N +R  Y
Sbjct: 478 VENFKGGMYLRLKARRACMNYERFTY 503


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 714 AKYENDVLVLHLQPRAQRCFGAPCDRE 794
           A Y+N VL L  +PRA+ C     D+E
Sbjct: 327 AAYDNIVLKLLTKPRARGCIIFGSDQE 353


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 528 SLLVCTIAECKSFVRGI 478
           +L+VCT+  C S + GI
Sbjct: 315 ALIVCTVNSCTSMLSGI 331


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 528 SLLVCTIAECKSFVRGI 478
           +L+VCT+  C S + GI
Sbjct: 368 ALIVCTVNSCTSMLSGI 384


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +3

Query: 474 NQSLERKTCIRRWCRQAD*TRQLEVHYLGGRTTECTSRVHNTKYNQYLKMSSKTDCN 644
           +QSL+R+  I    R  D T Q+ V     +    + RV+NT+ N+YL   S  + N
Sbjct: 331 HQSLDRQN-IDVVARNED-TLQMVVSMKIKQNVPQSGRVNNTQRNEYLLALSDRNQN 385


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -2

Query: 220 LPARTLLYSFSSSSWLEARFTSMIISTTLAL 128
           +PA T++    +  WL++R T  +I+ ++ L
Sbjct: 261 IPAVTMMLLTLTVLWLDSRSTERMIAASVNL 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,432
Number of Sequences: 438
Number of extensions: 4331
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)