Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_I15
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 35 0.10
05_01_0142 - 940421-940701,941262-941574 32 0.54
07_03_1136 + 24218601-24218734,24218769-24219906 31 0.94
03_01_0515 - 3864796-3865425 31 0.94
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.94
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 2.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.2
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.8
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 29 5.0
02_04_0382 - 22501041-22501279,22501717-22501810 29 5.0
05_01_0141 - 937428-937717,938483-938705 29 6.6
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 8.8
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 729 PXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXPLTXXXXXXPNPP 884
P PP G P P G PPP P G PP G P P PP
Sbjct: 11 PPPPQGGFPPQPPPMNPYGP--PPPQQPAYGHMPPPQGAPPPFLAPPPPPPP 60
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 32.3 bits (70), Expect = 0.54
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +3
Query: 678 PXSKNFXPXX-PXXGXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXP 848
P + + P P P PP P P G + P P G PPGG P
Sbjct: 30 PPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYP 87
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = -3
Query: 883 GGXGXXXXXXVRGXPPGGXPXPXXGXXGGG--LKXPXGXXXXXXWGXPKXGGXGXPXPXX 710
GG G G GG P G GGG L P G G P GG G P
Sbjct: 125 GGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGR 184
Query: 709 GXXG 698
G
Sbjct: 185 APGG 188
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.5 bits (68), Expect = 0.94
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +3
Query: 678 PXSKNFXPXXPXXGXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXPLTX 857
P S P P G P PP P P PPP P PP P
Sbjct: 54 PPSVTSSPPPPAAGPLMPPPPP---PPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPS 110
Query: 858 XXXXXPNPP 884
P PP
Sbjct: 111 PVKSSPPPP 119
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.94
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 678 PXSKNFXPXXPXXGXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXP 848
P K P P G P PP G P P G PPP P G PP P
Sbjct: 330 PPPKAAPPPPPPKGP-PPPPPAKGPP---PPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 699 PXXPXXGXGXPXPPXLGXPQXXXXXXPXG-XFKPPPXXPXXGXGXPP 836
P P G P PP P P G PPP P G PP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 699 PXXPXXGXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXPLTXXXXXXPN 878
P P P PP G P P PPP P G PP P P
Sbjct: 327 PPPPPPKAAPPPPPPKGPPP------PPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Query: 879 PP 884
PP
Sbjct: 381 PP 382
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = +1
Query: 673 PXPXPKIFXPXXXXXXXXXRXPPXWXPPKXFXXPXPXXXLNXPPXXPXXGGGSPXGGPP* 852
P P PK+ P PP+ P P PP G G P PP
Sbjct: 560 PPPIPKLLSPPAPQAPMPPLKASPVPPPEPSPPPAPKAA-PPPPPPKSTGPGPPRPPPPA 618
Query: 853 XXGXXXXXTPPXXXP 897
G PP P
Sbjct: 619 MPGSSKTRPPPPLKP 633
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 699 PXXPXXGXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPP 836
P G G P PP P P PPP G G PP
Sbjct: 340 PSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPP 385
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +3
Query: 699 PXXPXXGXGXPXPPXLGX----PQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXPLTXXXX 866
P P G P PP +G P G PP P G G PP P
Sbjct: 1112 PPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRG 1171
Query: 867 XXPNP 881
P P
Sbjct: 1172 GTPPP 1176
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +3
Query: 729 PXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXG--XPPGGXPLTXXXXXXPNPP 884
P PP +G P G PP P G G P PL P PP
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPP 1152
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 693 FXPXXPXXGXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGG 842
+ P P G P G PQ P G + PP P G PP G
Sbjct: 189 YPPAPPAQGYPPAAYPPAGYPQGGAYPPP-GSYPPPGSYPPQGSYPPPQG 237
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +1
Query: 736 PPXWXPPKX--FXXPXPXXXLNXPPXXPXXGGGSPXGGPP 849
P + PP + P P PP P GGG G PP
Sbjct: 60 PDYYDPPHSPDYYDPPPSPDYYDPPPSPYYGGGGGYGKPP 99
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 717 GXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXP 848
G G P PP G P PPP G G PP G P
Sbjct: 27 GHGYPYPPQQGYYPPPPTAYPP----PPPAGYGGGYGYPPAGYP 66
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 708 PXXGXGXPXPPXLGXPQXXXXXXPXGXFKPPPXXPXXGXGXPPGGXP 848
P G G P G Q P G K PP G PPG P
Sbjct: 612 PQTGYGTQPQPQGGYSQGSYGAPPQGQ-KAPPNTSPYGQAPPPGSAP 657
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,481,911
Number of Sequences: 37544
Number of extensions: 192324
Number of successful extensions: 474
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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