Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I11
         (1398 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0059 - 394001-394708                                             29   6.6  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.6  

>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -1

Query: 930 PXPXRAXXPPPXPXXXXRRXPXRPXKSXPXRP 835
           P P RA  PP  P    RR P  P  S P RP
Sbjct: 5   PPPRRAPPPPATPPPPPRRAP--PPPSPPIRP 34


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 21/78 (26%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
 Frame = -1

Query: 1065 PRPXXPRXXXASPGXXXPXXPXAXXXXXAPXAPXXALXXXXXXAXPXPXRAXXPPPXPXX 886
            P P  P+   A+P    P  P A      P  P            P P     PPP P  
Sbjct: 314  PPPPPPKPAAAAP--PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371

Query: 885  XXR-RXPXRPXKSXPXRP 835
              +   P  P K    RP
Sbjct: 372  GKKGGPPPPPPKGGASRP 389


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,207,195
Number of Sequences: 37544
Number of extensions: 142842
Number of successful extensions: 558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4408801040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)