Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I10
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0126 + 12130409-12130532,12131015-12131373                       30   3.0  
06_01_0690 + 5033943-5034740                                           29   3.9  
07_03_0177 - 14770777-14772045                                         29   6.9  

>06_02_0126 + 12130409-12130532,12131015-12131373
          Length = 160

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 901 SGXGXGGXXGXXXGWXSXGIXXGIRGXGWG*XGGFG 794
           +G G GG  G   G    G   G  G G+G  GG+G
Sbjct: 85  NGGGYGGGYGGYGGGYGGGYGGGGGGGGYGGYGGYG 120


>06_01_0690 + 5033943-5034740
          Length = 265

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = -3

Query: 919 GXXXVTSGXGXGGXXGXXXGWXSXGIXXGIRGXGWG*XGGFGXXNPRLEGKDXXG 755
           G     SG G GG  G   G    G   G  G G+G  GG+G      +G    G
Sbjct: 62  GPGGYASGGGGGGGGGGGGGNGGSGYGSG-SGSGYGQAGGYGPYGGYAQGGGGGG 115


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -3

Query: 898 GXGXGGXXGXXXGWXSXGIXXGIRGXGWG*XGGFG 794
           G G GG  G   G    G   GI G G+G  GGFG
Sbjct: 364 GGGLGGGGGGGGGGFGGGGGSGI-GGGFGKGGGFG 397


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,619,938
Number of Sequences: 37544
Number of extensions: 248883
Number of successful extensions: 639
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)