Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I07
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0259 - 42353992-42354111,42354255-42354385,42355484-423555...    57   2e-08
10_08_0391 + 17486109-17486210,17487032-17487129,17487331-174873...    55   8e-08
07_01_0668 - 5009631-5009643,5010048-5010092,5010413-5010556,501...    36   0.032
03_06_0151 + 31996822-31996958,31997114-31997267                       34   0.17 

>01_07_0259 -
           42353992-42354111,42354255-42354385,42355484-42355571,
           42356439-42357282,42357354-42357934,42358962-42359159
          Length = 653

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
 Frame = +3

Query: 135 AKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEEA 314
           A+ +A ++V+G  V+GRA  +A +Q I  + +                   S  +T +EA
Sbjct: 543 ARLLANLLVIGGTVLGRAAVQAYRQAIVNANKTGAAQEAINGIRRA-----SKAMTEQEA 597

Query: 315 MQILNI-EKVDPXKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDA 458
            QIL I EK    +I + Y+ +F  N  +K GSFYLQSK+ RAKE L+A
Sbjct: 598 RQILGISEKSTWEEIVQKYDTMFERN--AKNGSFYLQSKVHRAKECLEA 644


>10_08_0391 +
           17486109-17486210,17487032-17487129,17487331-17487361,
           17487655-17487707,17489254-17489402,17489828-17489898,
           17489988-17490131,17490249-17490309,17492180-17492265,
           17492839-17492926,17494012-17494142,17494266-17494394
          Length = 380

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = +3

Query: 138 KYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEEAM 317
           K IA +IV+G+ ++GRA  +A ++ +  + +                   S  +T +EA 
Sbjct: 268 KLIANLIVMGSGIIGRAMLQAYRKALDNANKTGVAHETINNIRRA-----SKTMTEQEAR 322

Query: 318 QILNI-EKVDPXKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLD 455
           QIL + E+    +I++ Y++LF  N KS  GSFYLQSK+ RAKE L+
Sbjct: 323 QILGVSEQSTWEEIAQRYDNLFERNAKS--GSFYLQSKVHRAKECLE 367


>07_01_0668 -
           5009631-5009643,5010048-5010092,5010413-5010556,
           5012583-5012761,5014711-5014773
          Length = 147

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 297 LTLEEAMQILNI-EKVDPXKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK 467
           +T  EA  IL + E   P K+ + ++ +   N    GGS YL SKI  AK+ L  + K
Sbjct: 69  MTRREAGLILGVRENAHPEKVKEAHKKVMVANHPDAGGSHYLASKINEAKDILLGKTK 126


>03_06_0151 + 31996822-31996958,31997114-31997267
          Length = 96

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +3

Query: 297 LTLEEAMQILNI-EKVDPXKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELKQT 473
           +T  EA  IL + E+    KI + ++ +   N    GGS Y+ SKI  AK+ L  + K  
Sbjct: 34  MTRREAALILGVRERAAFDKIKEAHKRVMVANHPDAGGSHYIASKINEAKDMLMGKGKSG 93

Query: 474 S 476
           S
Sbjct: 94  S 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,036,284
Number of Sequences: 37544
Number of extensions: 304389
Number of successful extensions: 793
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)