Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_I05
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 34 0.17
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 0.90
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 0.90
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.2
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 31 1.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.4
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 8.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.4
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = +3
Query: 765 PPXLGLXAXNP---PFXPXPLXPYPXNYRP*XPXPAKXPXY---PPPGXPXPG 905
PP GL A N P P P P P N P P P PPP P PG
Sbjct: 545 PPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 765 PPXLGLXAXNPPFXPXPLXPYPX-NYRP*XPXPAKXPXYPPPGXP 896
PP L L NPP P P P P RP P PA P PP P
Sbjct: 77 PPPLPLS--NPPAKPTPPPPPPKPTIRP-PPIPASPPPRPPASEP 118
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 765 PPXLGLXAXNPPFXPXPLXPYPX-NYRP*XPXPAKXPXYPPPGXP 896
PP L L NPP P P P P RP P PA P PP P
Sbjct: 299 PPPLPLS--NPPAKPTPPPPPPKPTIRP-PPIPASPPPRPPASEP 340
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +3
Query: 768 PXLGLXAXNPPFXPXP--LXPYPXNYRP*XPXPAKXPXYPPPGXPXP 902
P + A PP P P P P Y+ P P P YPPP P
Sbjct: 103 PQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYP 149
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 786 AXNPPFXPXPLXPYPXNYRP*XPXPA-KXPXYPPPGXPXP 902
A PP P P+ P P +Y P P A + Y PP P P
Sbjct: 313 AVPPPPIPPPIQPPPYSYYPVAPAAAPQVYHYAPPPPPPP 352
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 795 PPFXPXPLXPY--PXNYRP*XPXPAKXPXYPPPGXP 896
PP P PY P + P P PA YPPPG P
Sbjct: 105 PPGYPAGYPPYGMPPRHHPGYPHPAYG--YPPPGAP 138
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +3
Query: 795 PPFXPXPLXP-YPXNYRP*XPXPAKXPXYPPP--GXPXPG 905
PP + P YP Y P P P YP P G P PG
Sbjct: 97 PPGAEYQMPPGYPAGYPPYGMPPRHHPGYPHPAYGYPPPG 136
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 768 PXLGLXAXNPPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXP 902
P G +PP P P P P P + P PPP P P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPP 157
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +3
Query: 759 SFPPXLG---LXAXNPPFXPXPLXP-YPXNYRP*XPXPAKXPXYPPPGXPXPG 905
+FPP G + PP P P P P ++ P P P YP G PG
Sbjct: 284 AFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPG 336
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 807 PXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXPG 905
P P+ P P P P P +PPP P PG
Sbjct: 274 PPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPG 305
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 795 PPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXPG 905
PP Y Y P P P PPP P PG
Sbjct: 246 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG 282
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 807 PXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXPG 905
P P+ P P P P P +PPP P PG
Sbjct: 284 PPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPG 315
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 795 PPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXPG 905
PP Y Y P P P PPP P PG
Sbjct: 256 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG 292
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 792 NPPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXP 902
+PP P P P P RP P P P PPG P P
Sbjct: 242 DPPGPPGP--PGPPTRRP--PGPPGPPTRRPPGPPGP 274
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 795 PPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXP 902
PP P P P P P P P PPP P P
Sbjct: 48 PPICPPQFCPPPPMCPP-PPPPPPPPMCPPPPPPMP 82
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 768 PXLGLXAXNPPFXPXPLXPYPXNYRP*XPXPAKXPXYP 881
P G A N P P PY N P P + P YP
Sbjct: 87 PTQGYSAYNQQPPPLPQQPYQTNMYPSNPGYSSTPGYP 124
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +3
Query: 765 PPXLGLXAXNPPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXPG 905
PP G PP P L P P P P P PPP P PG
Sbjct: 736 PPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +3
Query: 765 PPXLGLXAXNPPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXPG 905
PP G PP P L P P P P P PPP P PG
Sbjct: 736 PPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPG 778
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +3
Query: 765 PPXLGLXAXNPPFXPXPLXPYPXNYRP*XPXPAKXPXYPPPGXPXPG 905
PP G PP P L P P P P P PPP P PG
Sbjct: 319 PPITG--GPPPPPPPGGLPPISGGPPPPPPPPGGCP--PPPPPPPPG 361
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/58 (27%), Positives = 21/58 (36%)
Frame = +3
Query: 714 PFSXLXLXVSQXXCRSFPPXLGLXAXNPPFXPXPLXPYPXNYRP*XPXPAKXPXYPPP 887
P++ + V + R P P P P P RP P + P YPPP
Sbjct: 2018 PYNPQPVVVQRPQFRPQPQPRPQPQPQPQPQPQPQPQQPYIQRPALTLPFQQPQYPPP 2075
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,909,210
Number of Sequences: 27780
Number of extensions: 380421
Number of successful extensions: 1176
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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