Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_I03
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97193-4|AAB52439.1|  691|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U97193-4|AAB52439.1|  691|Caenorhabditis elegans Hypothetical
           protein C06A5.6 protein.
          Length = 691

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = +2

Query: 677 TKATFNLTYEELLEYRNGVYNHAVNLQPGQLVSDFTVTIDIRESNKITELRVPEIXTGNE 856
           T  T  L  ++++ +R+   N    L   +LVS    T+DI + N    L + E     E
Sbjct: 272 TSMTMALEIKDVIGHRSVAENDPTALSYDELVSKQLPTVDIDDHNSSVVLDLEESVIAQE 331

Query: 857 IDATN 871
           + +TN
Sbjct: 332 LGSTN 336


>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 337 SNGGTCSTNKTDEDGCEVRDIYAIRSHGYCSAC 435
           +N   CS N  +  GC  R  Y   + GY S C
Sbjct: 60  NNNNGCSCNPCNGGGCAPRCSYCPNNFGYSSCC 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,976,394
Number of Sequences: 27780
Number of extensions: 439295
Number of successful extensions: 1232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)