Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_I01
(1333 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 40 8e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.013
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.089
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 30 0.14
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.16
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.21
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.27
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.36
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.63
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 3.3
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.4
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 5.8
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 27 7.7
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 39.9 bits (89), Expect = 8e-04
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = +2
Query: 173 PPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
PP PPPPP PP PPP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP--PPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 170 PPPXX----PPPPPXPPXXXXXXXPPPXXPPPPP 259
PPP PPPPP PP PPP PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPP 783
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = +2
Query: 155 PXXXXPPPXXP----PPPPXPPXXXXXXXPPPXXPPPP 256
P PP P PPPP PP PPP PPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.9 bits (79), Expect = 0.013
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = +1
Query: 121 PPXXXXXXPXXXXXXXXPPXXX---PPPPPPPXXXXXXXTPXXXPPPPPP 261
PP P PP PPPPPPP P PPPPPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP--PPPPPP 783
Score = 30.3 bits (65), Expect = 0.63
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 190 PPPPPPXXXXXXXTPXXXPPPPP 258
PPPPPP P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
Score = 27.9 bits (59), Expect = 3.3
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = +1
Query: 187 PPPPPPPXXXXXXXTPXXXPPPPPPXXXFLXXWXPFXKN*XKKKXXXTKXXPPPXXXXXP 366
PPPPPP TP P P PP + P PPP
Sbjct: 732 PPPPPP---AVIVPTPAPAPIPVPPPAPIMGGPPP--------------PPPPPGVAGAG 774
Query: 367 PPPXXAPAP 393
PPP P P
Sbjct: 775 PPPPPPPPP 783
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 170 PPPXXPPPPPXP-PXXXXXXXPPPXXPPPPPXXXFFWXSGXP 292
PPP P P P P P PPPPP +G P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 170 PPPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
PPP PPPP P P P P
Sbjct: 775 PPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.013
Identities = 27/79 (34%), Positives = 27/79 (34%)
Frame = -2
Query: 390 GGRGXGGGGXXRXXXGGXXFXXXXFFFXLIFXEGXPXXQKXXXXGGGGGXXGGGXXXXXX 211
GG G GGG G F F EG GG GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGG----EGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 210 XGGXGGGGGXXGGGXXXXG 154
GG GGG G GGG G
Sbjct: 244 PGGFGGGLGGFGGGPGGFG 262
Score = 35.5 bits (78), Expect = 0.017
Identities = 23/68 (33%), Positives = 24/68 (35%)
Frame = -3
Query: 374 GGGGXXXXXGGGXXXVXXFFFFX*FXKKGHQXXKKXXXGGGGGGXXXGVXXXXXXXGGGG 195
G GG GG F F F +GH GGG GG G GG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 194 GGGXXXGG 171
GG GG
Sbjct: 249 GGLGGFGG 256
Score = 33.9 bits (74), Expect = 0.051
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 258 GGGGGXXGGGXXXXXXXGGXGGGGGXXGGGXXXXG 154
GG GG GG GG GGG G GGG G
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 31.9 bits (69), Expect = 0.21
Identities = 28/85 (32%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = -2
Query: 258 GGGGGXXGGG-XXXXXXXGGXGGGGGXXGGGXXXXGXXXXXXXXXXGXXXXXXXXXFFGG 82
GGG G GGG GG GG GG G G G G FGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGG----HGGFGGGPGGFEGGPGGFGG 242
Query: 81 G-GGXXAGXGXXXXXXPRXXPGXGG 10
G GG G G G GG
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 31.1 bits (67), Expect = 0.36
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -2
Query: 291 GXPXXQKXXXXGGGGGXXGGGXXXXXXXGGXGGGGGXXGG 172
G P + G GGG G G GG GG GG GG
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -3
Query: 302 FXKKGHQXXKKXXXGGGGGGXXXGVXXXXXXXGGGGGGGXXXGGXXXXXXXXGXXXXXXG 123
F +GH GGG GG G GG GG G GG G G
Sbjct: 180 FHHRGHNGGGFGGFGGGSGGPPPG-PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG 238
Query: 122 G 120
G
Sbjct: 239 G 239
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -2
Query: 390 GGRGXGGGGXXRXXXGGXXFXXXXFFFXLIFXEGXPXXQKXXXXGGGGGXXGGGXXXXXX 211
G G GG G GG F EG P G GGG G G
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGF-------EGGPGGFGGGPGGFGGGLGGFGGGPGGF 261
Query: 210 XGGXGGGGG 184
GG GG GG
Sbjct: 262 GGGPGGHGG 270
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 260 GGGGGGXXXGVXXXXXXXGGGGGGGXXXGG 171
GGG GG G+ GG GGG GG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.089
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 155 PXXXXPPPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
P PP PPPP PP PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAG----PPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.63
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 155 PXXXXPPPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
P PP P PP PP PPP PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPP---MSVPPPPSAPPMP 1724
Score = 30.3 bits (65), Expect = 0.63
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +1
Query: 175 PXXXPPP---PPPPXXXXXXXTPXXXPPPPPP 261
P PPP PPPP P PPPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 155 PXXXXPPPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
P PPP PP P PP P P P
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 173 PPXXPPPPPXPPXXXXXXXPPPXXPPPPP 259
PP P P PPP PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.9 bits (64), Expect(2) = 0.14
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 73 PPPPPKKXXXXXXXXXPPXXXXXXPXXXXXXXXPPXXXPPPPPPP 207
PPPPP P P PPPPPPP
Sbjct: 908 PPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPP 952
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 233 PPXXPPPPP 259
PP PPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 4.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 176 PXXPPPPPXP 205
P PPPPP P
Sbjct: 905 PTPPPPPPLP 914
Score = 21.0 bits (42), Expect(2) = 0.14
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 244 PPPPPP 261
PPPPPP
Sbjct: 948 PPPPPP 953
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.16
Identities = 18/74 (24%), Positives = 20/74 (27%)
Frame = +2
Query: 170 PPPXXPPPPPXPPXXXXXXXPPPXXPPPPPXXXFFWXSGXPSXKIXKKKKXXXXNXXPPX 349
PP PP P PP PPPPP + P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTY 227
Query: 350 XXRXXPPPPXPRPP 391
+ P P P PP
Sbjct: 228 TPKQADPLPAPPPP 241
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 170 PPPXXPPPPPXPPXXXXXXXPPPXXPPPPP 259
PPP PP P P PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 25.8 bits (54), Expect(2) = 0.88
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 155 PXXXXPPPXXPPPPPXPP 208
P P PPPPP PP
Sbjct: 179 PATSLPSDYNPPPPPPPP 196
Score = 24.6 bits (51), Expect(2) = 0.53
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 170 PPPXXPPPPPXPP 208
P P PPPP PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 24.2 bits (50), Expect(2) = 0.53
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 155 PXXXXPPPXXPPPP 196
P PPP PPPP
Sbjct: 184 PSDYNPPPPPPPPP 197
Score = 22.2 bits (45), Expect(2) = 0.88
Identities = 17/65 (26%), Positives = 17/65 (26%), Gaps = 1/65 (1%)
Frame = +2
Query: 185 PPPPPXPPXXXXXXXPPPXXPPPPPXXXFFW-XSGXPSXKIXKKKKXXXXNXXPPXXXRX 361
P PP P P PPPP S P N PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPS 280
Query: 362 XPPPP 376
PP P
Sbjct: 281 QPPRP 285
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.21
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 258 GGGGGXXGGGXXXXXXXGGXGGG-GGXXGGG 169
GG GG GG GG GGG GG GGG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
Score = 29.1 bits (62), Expect(2) = 0.27
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 258 GGGGGXXGGGXXXXXXXGGXGGGGGXXGG 172
GG GG GG GG GG G GG
Sbjct: 38 GGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -2
Query: 258 GGGGGXXGGGXXXXXXX-GGXGGGGGXXGGGXXXXG 154
GG GG GGG GG GG G GG G
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 258 GGGGGXXGGGXXXXXXXGGXGGGGGXXGG 172
GGG G GG GG GG GG GG
Sbjct: 29 GGGRGGARGG-GRGGARGGRGGRGGARGG 56
Score = 21.0 bits (42), Expect(2) = 0.27
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 390 GGRGXGGGGXXRXXXGG 340
GGRG GGG GG
Sbjct: 23 GGRGGFGGGRGGARGGG 39
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/74 (25%), Positives = 22/74 (29%)
Frame = +2
Query: 170 PPPXXPPPPPXPPXXXXXXXPPPXXPPPPPXXXFFWXSGXPSXKIXKKKKXXXXNXXPPX 349
PP PP P PP P P PP P P+ + P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSS--LPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 350 XXRXXPPPPXPRPP 391
PPPP + P
Sbjct: 197 MPPKVPPPPLSQAP 210
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.36
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 155 PXXXXPPPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
P P P PPP PP PP PP P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 30.7 bits (66), Expect = 0.47
Identities = 22/87 (25%), Positives = 23/87 (26%), Gaps = 1/87 (1%)
Frame = +1
Query: 4 PXPPXAXXXAWXXXXXPPXTGXXPPPPPKKXXXXXXXXXPPXXXXXXPXXXXXXXXP-PX 180
P PP A PP PPPPP + PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 181 XXPPPPPPPXXXXXXXTPXXXPPPPPP 261
P PP TP PP P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLP 424
Score = 30.7 bits (66), Expect = 0.47
Identities = 27/115 (23%), Positives = 28/115 (24%), Gaps = 2/115 (1%)
Frame = +1
Query: 55 PXTGXXPPPPPKKXXXXXXXXXPPXXXXXXPXXXXXXXXPPXXXPPPPPPPXXXXXXXTP 234
P TG PPP PP PP P P P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 235 XXXPPPPPPXXXFLXXWXPFXKN*XKKKXXXT-KXXPPPXXXXXP-PPPXXAPAP 393
P PP P + PP P PPP APAP
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.9 bits (64), Expect = 0.83
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 7/32 (21%)
Frame = +1
Query: 187 PPPPPPPXXXXXXXTP-------XXXPPPPPP 261
PPPPPPP P PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 173 PPXXPPPPPXPPXXXXXXXPPPXXPPPPP 259
PP P PP P PP P PPP
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.63
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 170 PPPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
PPP PP P P PP PP P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/70 (24%), Positives = 18/70 (25%)
Frame = +1
Query: 52 PPXTGXXPPPPPKKXXXXXXXXXPPXXXXXXPXXXXXXXXPPXXXPPPPPPPXXXXXXXT 231
P +G P P P P PP PP P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 232 PXXXPPPPPP 261
P PP P P
Sbjct: 1213 PSTAPPVPTP 1222
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 1/69 (1%)
Frame = +1
Query: 55 PXTGXXPPPPPKKXXXXXXXXXPPXXXXXXPXXXXXXXXP-PXXXPPPPPPPXXXXXXXT 231
P PP P P P P P PP PPP T
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 232 PXXXPPPPP 258
P PP P
Sbjct: 1222 PSAGLPPVP 1230
Score = 26.6 bits (56), Expect = 7.7
Identities = 28/130 (21%), Positives = 30/130 (23%), Gaps = 2/130 (1%)
Frame = +1
Query: 10 PPXAXXXAWXXXXXPPXTGXXPPPPPK--KXXXXXXXXXPPXXXXXXPXXXXXXXXPPXX 183
PP + P +G P P P PP P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK---PSVAVPPVPAPSG 1119
Query: 184 XPPPPPPPXXXXXXXTPXXXPPPPPPXXXFLXXWXPFXKN*XKKKXXXTKXXPPPXXXXX 363
PP P P P PP P P P K P P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 364 PPPPXXAPAP 393
P P A P
Sbjct: 1180 PVPKPAAGVP 1189
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 193 PPPPPXXXXXXXTPXXXPPPPP 258
PPPPP P PPPP
Sbjct: 908 PPPPPTASMTASAPAIASPPPP 929
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 233 PPXXPPPPPXXXFFWXSGXPS 295
PP PPPPP F+ S P+
Sbjct: 306 PPPPPPPPPSNDFWKDSNEPA 326
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = -2
Query: 300 FXEGXPXXQKXXXXGGGGGXXG--GGXXXXXXXGGXGGGGGXXGGG 169
F G P GGG G GG GG GG GG G G
Sbjct: 430 FIAGRPCRLDFSTPRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 170 PPPXXPPPPPXPPXXXXXXXPPPXXPPPP 256
PP PPP P PPP P P
Sbjct: 280 PPEGSPPPMPIELLSYIINMPPPLLPQEP 308
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,175,711
Number of Sequences: 5004
Number of extensions: 50704
Number of successful extensions: 608
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 731281504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -