Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H24
(997 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein thioest... 111 3e-24
L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein thioest... 111 3e-24
CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein. 111 3e-24
BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein thioe... 111 3e-24
AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein thio... 111 3e-24
AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein thioe... 111 3e-24
AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein thio... 92 4e-20
>U44772-1|AAB06236.1| 306|Homo sapiens palmitoyl protein
thioesterase protein.
Length = 306
Score = 111 bits (268), Expect = 3e-24
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3
Query: 192 PTPIVLWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQ 371
P P+V+WHGMGD+CC ++G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 372 XEYVCEKLAADPKLSXXFNVXGFSQ 446
VC+ LA DPKL +N GFSQ
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQ 116
>L42809-1|AAA85337.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 111 bits (268), Expect = 3e-24
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3
Query: 192 PTPIVLWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQ 371
P P+V+WHGMGD+CC ++G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 372 XEYVCEKLAADPKLSXXFNVXGFSQ 446
VC+ LA DPKL +N GFSQ
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQ 116
>CR542053-1|CAG46850.1| 306|Homo sapiens PPT1 protein.
Length = 306
Score = 111 bits (268), Expect = 3e-24
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3
Query: 192 PTPIVLWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQ 371
P P+V+WHGMGD+CC ++G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 372 XEYVCEKLAADPKLSXXFNVXGFSQ 446
VC+ LA DPKL +N GFSQ
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQ 116
>BC008426-1|AAH08426.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 111 bits (268), Expect = 3e-24
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3
Query: 192 PTPIVLWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQ 371
P P+V+WHGMGD+CC ++G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 372 XEYVCEKLAADPKLSXXFNVXGFSQ 446
VC+ LA DPKL +N GFSQ
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQ 116
>AL512599-15|CAI11025.1| 306|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 306
Score = 111 bits (268), Expect = 3e-24
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3
Query: 192 PTPIVLWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQ 371
P P+V+WHGMGD+CC ++G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 372 XEYVCEKLAADPKLSXXFNVXGFSQ 446
VC+ LA DPKL +N GFSQ
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQ 116
>AF022211-1|AAB72224.1| 306|Homo sapiens palmitoyl-protein
thioesterase protein.
Length = 306
Score = 111 bits (268), Expect = 3e-24
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +3
Query: 192 PTPIVLWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQ 371
P P+V+WHGMGD+CC ++G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q
Sbjct: 32 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQ 91
Query: 372 XEYVCEKLAADPKLSXXFNVXGFSQ 446
VC+ LA DPKL +N GFSQ
Sbjct: 92 VTTVCQALAKDPKLQQGYNAMGFSQ 116
>AL512599-16|CAI11026.1| 279|Homo sapiens palmitoyl-protein
thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
infantile) protein.
Length = 279
Score = 91.9 bits (218), Expect(2) = 4e-20
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = +3
Query: 219 MGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQXEYVCEKLA 398
+GD+CC ++G+ K +EK IPG+YVLSL+IG +ED EN +F+N N Q VC+ LA
Sbjct: 70 IGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALA 129
Query: 399 ADPKLSXXFNVXGFSQ 446
DPKL +N GFSQ
Sbjct: 130 KDPKLQQGYNAMGFSQ 145
Score = 27.1 bits (57), Expect(2) = 4e-20
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 192 PTPIVLWHGMG 224
P P+V+WHGMG
Sbjct: 32 PLPLVIWHGMG 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,590,182
Number of Sequences: 237096
Number of extensions: 1513767
Number of successful extensions: 3829
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3808
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13267998240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -