Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_H24
         (997 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...    88   8e-18
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...    88   8e-18

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score = 88.2 bits (209), Expect = 8e-18
 Identities = 37/80 (46%), Positives = 51/80 (63%)
 Frame = +3

Query: 207 LWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQXEYVC 386
           +WHGMGD CC   ++GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N      C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 387 EKLAADPKLSXXFNVXGFSQ 446
            K+  DP+L   +N  GFSQ
Sbjct: 61  IKIKNDPELKNGYNAIGFSQ 80


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score = 88.2 bits (209), Expect = 8e-18
 Identities = 37/80 (46%), Positives = 51/80 (63%)
 Frame = +3

Query: 207 LWHGMGDTCCMSFTLGSFKIFLEKNIPGVYVLSLQIGNNTVEDXENGYFMNPNLQXEYVC 386
           +WHGMGD CC   ++GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N      C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 387 EKLAADPKLSXXFNVXGFSQ 446
            K+  DP+L   +N  GFSQ
Sbjct: 61  IKIKNDPELKNGYNAIGFSQ 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,116,440
Number of Sequences: 27780
Number of extensions: 233582
Number of successful extensions: 514
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2605097262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)