Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H21
(957 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.060
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.18
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.24
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.32
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.42
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.42
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.9
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 27 5.2
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 9.0
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.060
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 620 PPXGAGXPKXXSPWXPAPXPPXXXNQTGAXXPXXPXXPPPP 742
PP + P P P PP + A P P PPPP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 5.2
Identities = 20/80 (25%), Positives = 21/80 (26%), Gaps = 5/80 (6%)
Frame = +2
Query: 656 PWXPAPXPPXXXNQTGAXXPXXPXXPPP-----PPPXKKXXKXXXXXXXXXXXXXXXXXX 820
P PAP P + P P PPP PP K
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 821 XXXPPPXKKXPXAPPXPPPP 880
P P PP PPP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPP 204
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 802 PPKNXXPPXPPPXKKTPXXXPPXXXP 879
PP N PP PPP + P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTP 852
PPPPP PP PP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 486 PPPPXGXXGXXIXPPPPXP 542
PPPP G PPPP P
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 656 PWXPAPXPPXXXNQTGAXXPXXPXXPPPPPPXKK 757
P P P PP G P P PPPP KK
Sbjct: 6 PGNPPPPPPPP----GFEPPSQPPPPPPPGYVKK 35
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPPXXXP 879
PP PP + PP P P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 28.7 bits (61), Expect = 1.3
Identities = 28/117 (23%), Positives = 31/117 (26%), Gaps = 1/117 (0%)
Frame = +2
Query: 530 PPXPXKKNXXIXGKGXXKHXPPXXXGLXXPP-PXGAGXPKXXSPWXPAPXPPXXXNQTGA 706
PP P K P + PP P +G P P AP P +GA
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV---PSGA 1139
Query: 707 XXPXXPXXPPPPPPXKKXXKXXXXXXXXXXXXXXXXXXXXXPPPXKKXPXAPPXPPP 877
P PP P PP K PP PPP
Sbjct: 1140 PPVPKPSVAAPPVPAPSG--APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPPXXXP 879
P P P + PP P P P PP P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPPXXXP 879
P P P PP PPP + P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPPXXXP 879
P P P PP PPP P P P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPP 867
PP PP + PP P P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVP 1232
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.32
Identities = 30/128 (23%), Positives = 37/128 (28%)
Frame = +2
Query: 491 PPXGXXGXXNXAPPPXPXKKNXXIXGKGXXKHXPPXXXGLXXPPPXGAGXPKXXSPWXPA 670
PP APPP P N + + PP P + P S P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSP---PNSPPR------PIAPVSMNPAINSTSKP- 290
Query: 671 PXPPXXXNQTGAXXPXXPXXPPPPPPXKKXXKXXXXXXXXXXXXXXXXXXXXXPPPXKKX 850
P PP + A PPPPPP + + PPP
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNR---GKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 851 PXAPPXPP 874
+ P PP
Sbjct: 348 AGSIPLPP 355
Score = 30.7 bits (66), Expect = 0.32
Identities = 24/95 (25%), Positives = 25/95 (26%)
Frame = +2
Query: 590 PPXXXGLXXPPPXGAGXPKXXSPWXPAPXPPXXXNQTGAXXPXXPXXPPPPPPXKKXXKX 769
PP PP G G P P P PP P PPPPP +
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLP--PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS- 371
Query: 770 XXXXXXXXXXXXXXXXXXXXPPPXKKXPXAPPXPP 874
PPP AP PP
Sbjct: 372 -TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 29.5 bits (63), Expect = 0.73
Identities = 33/147 (22%), Positives = 40/147 (27%), Gaps = 19/147 (12%)
Frame = +2
Query: 491 PPXGXXGXXNXAPPPXPXKKNXX-----IXGKGXXKHXPPXXXGLXX----PPPXGAGX- 640
PP G + PPP P ++ + +G PP PPP +
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 641 ------PKXXSPWXPAPXPPXXXNQTGAXXPXXPXXP---PPPPPXKKXXKXXXXXXXXX 793
P P AP P N + P P P P PP
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 794 XXXXXXXXXXXXPPPXKKXPXAPPXPP 874
PP P APP PP
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 4/33 (12%)
Frame = +1
Query: 793 PPPPPKNXXP----PXPPPXKKTPXXXPPXXXP 879
PPPPP P PP + P PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 25.8 bits (54), Expect = 9.0
Identities = 35/142 (24%), Positives = 36/142 (25%), Gaps = 9/142 (6%)
Frame = +2
Query: 479 KKXPPPXGXXGXXNXAPPPXPXKKNXXIXGKGXXKHXPPXXXGLXXPPPXGAGXPKXXSP 658
KK PPP PPP + G G P PPP P
Sbjct: 308 KKRPPP---------PPPPSRRNRGKPPIGNGSSNSSLPP----PPPPPRSNAAGSIPLP 354
Query: 659 ----WXPAPXPPXXXNQTGAXXPXXP-----XXPPPPPPXKKXXKXXXXXXXXXXXXXXX 811
P P PP TG P PP PPP
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP---AIPGRSAPALPPLGNASR 411
Query: 812 XXXXXXPPPXKKXPXAPPXPPP 877
P P P APP PP
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPP 433
Score = 25.8 bits (54), Expect = 9.0
Identities = 22/90 (24%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Frame = +2
Query: 482 KXPPPXGXXGXXNXAPPPXPXKKNXXIXGKGXXKHXPPXXXGLXXPPPXGA--GXPKXXS 655
+ PPP + P P P I G+ P PP P
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPA-----IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Query: 656 PWXPAPXPPXXXNQTGAXXPXXPXXPPPPP 745
P P PP A P P P PP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 793 PPPPPKN-XXPPXPPPXKKTPXXXPPXXXP 879
PPPPP + PP PP P PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 617 PP--PXGAGXPKXXSPWXPAPXPPXXXNQTGAXXPXXPXXPPPPP 745
PP P A P+ +P P P + P P PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.42
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 486 PPPPXGXXGXXIXPPPPXP 542
PPPP G G PPPP P
Sbjct: 764 PPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.55
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPPXXXP 879
PPP P PP PPP PP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.5 bits (63), Expect = 0.73
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +2
Query: 581 KHXPPXXXGLXXPPPXGAGXP-KXXSP-WXPAPXPPXXXNQTGAXXPXXPXXPPPPPP 748
K PP + P P A P +P P PP GA P PPPPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP----PPPPPP 783
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 479 KKXPPPXGXXGXXNXAPPPXPXKKNXXIXGKGXXKHXPPXXXGLXXPPP 625
K PPP AP P P I G PP G PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 731 PPPPPPXKKXXKXXXXXXXXXXXXXXXXXXXXXPPPXKKXPXAPPXPPPP 880
PPPPP PPP PP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPPXXXP 879
PP P PP PPP PP P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 9.0
Identities = 18/74 (24%), Positives = 20/74 (27%), Gaps = 2/74 (2%)
Frame = +2
Query: 665 PAPXPPXXXNQTGAXXPXXPXXPPPPPPXKKXXKXXXXXXXXXXXXXXXXXXXXXPPPXK 844
P+P P + PPPPPP PPP
Sbjct: 710 PSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Query: 845 KXPXAPP--XPPPP 880
PP PPPP
Sbjct: 770 VAGAGPPPPPPPPP 783
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +2
Query: 722 PXXPPPPPPXKKXXKXXXXXXXXXXXXXXXXXXXXXP--PPXKKXP-XAPPXPPPP 880
P PPPPPP + P P + P APP PPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 722 PXXPPPPPPXKKXXKXXXXXXXXXXXXXXXXXXXXXPPPXKKXPXAPPXPP 874
P PPPPPP PP P PP PP
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 793 PPPPPKNXXPPXPPPXKKTPXXXPPXXXP 879
PPPPP P PP PP P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 5.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 842 KKXPXAPPXPPPP 880
KK P PP PPPP
Sbjct: 220 KKVPRGPPSPPPP 232
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Frame = +1
Query: 793 PPPPPKNXXPP----XPPPXKKTPXXXPPXXXP 879
PPPPP+ PP PP + PP P
Sbjct: 207 PPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAP 239
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,656,555
Number of Sequences: 5004
Number of extensions: 22400
Number of successful extensions: 300
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 489310570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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