Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H20
(929 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0155 - 17773121-17773576,17773744-17774322 35 0.080
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 34 0.14
07_03_0820 - 21749477-21749866,21751192-21751590 33 0.24
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270... 31 0.99
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 1.7
03_03_0188 + 15269347-15270213 29 4.0
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 29 5.3
05_03_0676 - 16853937-16854042,16854605-16854700,16854920-168550... 29 7.0
02_01_0622 - 4658133-4658150,4658269-4658337,4658436-4658462,465... 29 7.0
10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223 28 9.2
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 9.2
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 9.2
01_06_1293 - 36050847-36051304,36052343-36052826 28 9.2
01_05_0490 + 22672241-22674679 28 9.2
>03_04_0155 - 17773121-17773576,17773744-17774322
Length = 344
Score = 35.1 bits (77), Expect = 0.080
Identities = 30/86 (34%), Positives = 39/86 (45%)
Frame = -3
Query: 306 RRAKTGRSIRRGPQVRSRIRCGTGGGRSGLMARSSGISENVDEKDRLKAVKGGGW*EHLL 127
RRAK +RRG R+ +GGGR AR G + V + R+ GG LL
Sbjct: 23 RRAKA--VVRRGG---GRVAGTSGGGREA--ARRGGAAAAVRQGGRVLGRSGGEEDRLLL 75
Query: 126 RGEKTSSVLERARRENSGAQAGHGGV 49
G +T R+ + SGA G GV
Sbjct: 76 HGRRTKGRRHRSGKGRSGAGVGLAGV 101
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 34.3 bits (75), Expect = 0.14
Identities = 27/65 (41%), Positives = 29/65 (44%)
Frame = +2
Query: 50 TPPCPACAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPER 229
TPP PA AP L RS V P H PPP A F + S IP RA + R
Sbjct: 14 TPPAPAPAPPQVFLRRS----VLPPPPAPHHAPPPPGAHVHYFRAA-SPIPIFRAAASSR 68
Query: 230 PPPVP 244
PP P
Sbjct: 69 PPRPP 73
>07_03_0820 - 21749477-21749866,21751192-21751590
Length = 262
Score = 33.5 bits (73), Expect = 0.24
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 152 PFTALRRSFSSTFSLIPEERAISPERPPPVPH 247
P ++ S SST SL+P A+ P PPP PH
Sbjct: 23 PLSSPSSSSSSTHSLLPRPPALWPPPPPPPPH 54
>04_04_1093 +
30825722-30826168,30826457-30826608,30826926-30827048,
30827240-30827384,30828032-30828093,30828373-30828586,
30829671-30830585,30830827-30831076,30831164-30831432
Length = 858
Score = 31.5 bits (68), Expect = 0.99
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 53 PPCPACAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERP 232
PP P+ P R + + +PR R H P P AL S S++ S + RP
Sbjct: 7 PPPPSSPPSSPPPLRHSPAALGTPRSRRRHSPSPSLALTPSSSASASASASTSSRPKVRP 66
Query: 233 PP 238
P
Sbjct: 67 SP 68
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2
Query: 62 PACAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPP 238
P+ PE S AR L S C HQPPP A + S+ P A +P R P
Sbjct: 612 PSPTPEASN-ARGGEMLSSSTSTHCLHQPPPPPASHQFRSAAAFRRPPSPAAAPLRARP 669
>03_03_0188 + 15269347-15270213
Length = 288
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 113 VFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVP 244
+F P S+ PF L + SS+ + + +A P PPP P
Sbjct: 39 LFLPSSSSSYLDSPFHGLLHTSSSSSATMSPSQAPPPHPPPPAP 82
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 243 GTGGGRSGLMARSSGISENVDEKDRLKAVKGG 148
GTGG AR+S N+DE+ R++A+ G
Sbjct: 561 GTGGSTMQFPARTSSAPPNLDEQKRMQALPEG 592
>05_03_0676 -
16853937-16854042,16854605-16854700,16854920-16855089,
16856742-16856825,16857042-16857119,16858053-16858216,
16858345-16858429
Length = 260
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 338 ILVVLPTLWIAASLFIFWKCVQCPISV 418
I VVL W+AA L FW C C V
Sbjct: 120 IFVVLCKYWVAAKLDSFWVCPICATRV 146
>02_01_0622 -
4658133-4658150,4658269-4658337,4658436-4658462,
4658808-4658873,4658954-4659076,4659562-4659629,
4659703-4659766,4659994-4660135,4660218-4660306,
4660574-4660637,4660870-4661021,4661124-4661261,
4661742-4661867,4661971-4662183,4662343-4662426,
4662583-4662742,4662993-4663126,4664047-4664136,
4664313-4664471,4665528-4665611,4666170-4666289,
4666338-4666391,4666899-4666945,4667556-4667598,
4667730-4668586,4668845-4668899
Length = 1081
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 747 LRERHNXPVS*THRHVEYNRLLF 679
+RERHN P+ RH Y +LF
Sbjct: 810 IRERHNRPLKTPLRHAHYTTILF 832
>10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223
Length = 254
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 68 CAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERPPPVPH 247
C+P + A + T + RKR H A+ + S S P +R+ +P PPP P
Sbjct: 178 CSPHAATAAATATATA-ARRKRLRHAH----AMASTSDSDNSTSPAKRSFTPSTPPPPPT 232
Query: 248 L 250
L
Sbjct: 233 L 233
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Frame = +2
Query: 146 PPPFTALRRSFSSTFSLIPEERAISPERP------PPVPHLIRLLTWGPRLMLRPVFALL 307
PPP + S L+P+ + P P PP P +R GPR + P
Sbjct: 87 PPPSSTASSSLPPPTPLLPKHQQAPPPPPPTQSHQPPPPVAVRAPRGGPRRLKVPHILSD 146
Query: 308 SIVSHPA 328
S V+ PA
Sbjct: 147 SSVASPA 153
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 158 TALRRSFSSTFSLIPEERAISPERPPPVPHLIRLLTWGPRLMLRPV 295
TA S SS + P + RPPP PHL R P L +P+
Sbjct: 5 TAASASASSAAASPPSAHLLRLSRPPPFPHLRR--RCAPHLPSKPL 48
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 143 QPPPFTALRRSFSSTFSLIPEERAISPERPPP 238
+PPP L R + F L A+ P PPP
Sbjct: 118 RPPPLPVLHRPLARPFPLAMAPTAMPPPPPPP 149
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 53 PPCPACAPEFSRLARSNTELVFSPRKRCSHQPPPFTALRRSFSSTFSLIPEERAISPERP 232
PP P SR P Q PPF R T+ L P + P P
Sbjct: 642 PPPPPPTTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPLPPPPP 701
Query: 233 PPVP 244
PP P
Sbjct: 702 PPPP 705
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,810,080
Number of Sequences: 37544
Number of extensions: 466854
Number of successful extensions: 1757
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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