Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H18
(870 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 40 3e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 8e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 8e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.007
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.017
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.023
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.28
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.28
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 2.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.5
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.6
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 26 6.1
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.1
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 22 7.7
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 26 8.0
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = +3
Query: 663 PXXXXTXPXXPPPXXAXPHXXYPXXPPPX--APPXPXPPPXXXXPPRAPPXXGPGXAXSL 836
P + P P A P P PPP PP P PP PP APP P +
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 837 XP 842
P
Sbjct: 1743 VP 1744
Score = 33.9 bits (74), Expect = 0.030
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 699 PXXAXPHXXYPXXPPPXAPPXPXPPPX-XXXPPRAPPXXGPGXAXSLXPPSXP 854
P P PP + P P PPP PP APP P S PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPM--PAGPPSAPPPPLP 1736
Score = 29.5 bits (63), Expect = 0.65
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Frame = +3
Query: 684 PXXPPPXXAXPHXXYPXXPPPXAPP----XPXPPPXXXXPPRAPPXXGPGXAXSL 836
P PPP + P PPP APP P PP AP PG +L
Sbjct: 1705 PTPPPPPMSVP-------PPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRSAL 1752
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.1 bits (87), Expect = 8e-04
Identities = 28/83 (33%), Positives = 28/83 (33%)
Frame = -3
Query: 853 GXEGGXREXAXPGPXXGGARGGXXXXGGGXGXGGAXGGGXLGXXXCGXAXXGGGXXGXVX 674
G GG PGP G GG G G G GGG G G GGG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP-GGFEGGPGGFGGGPGGFGG 249
Query: 673 XXXGXGKXXKKKXXRXGGXGGGG 605
G G GG GG G
Sbjct: 250 GLGGFGGGPGGFGGGPGGHGGPG 272
Score = 32.3 bits (70), Expect = 0.092
Identities = 24/71 (33%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Frame = -3
Query: 805 GGARGGXXXXGGG-----XGXGGAXGGGXLGXXXCGXAXXGGGXXGXVXXXXGXGKXXKK 641
GG GG GG G GG G G G G GGG G G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 640 KXXRXGGXGGG 608
GG GGG
Sbjct: 247 FGGGLGGFGGG 257
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 8e-04
Identities = 24/83 (28%), Positives = 28/83 (33%)
Frame = +3
Query: 606 PPPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXX 785
PPPP PP + P PPP + P P + P P PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 786 XPPRAPPXXGPGXAXSLXPPSXP 854
R PP A S PP+ P
Sbjct: 371 STGRQPPPLSSSRAVS-NPPAPP 392
Score = 33.9 bits (74), Expect = 0.030
Identities = 27/82 (32%), Positives = 27/82 (32%), Gaps = 7/82 (8%)
Frame = +3
Query: 612 PPXPPXLXFFFFXXFPXPXXXXTXPXXPP-PXXAXPHXXYPXXPP------PXAPPXPXP 770
PP PP P P PP P A P P PP PP P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 771 PPXXXXPPRAPPXXGPGXAXSL 836
P PP APP P SL
Sbjct: 421 PSL---PPSAPPSLPPSAPPSL 439
Score = 33.5 bits (73), Expect = 0.040
Identities = 24/80 (30%), Positives = 26/80 (32%)
Frame = +3
Query: 606 PPPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXX 785
PPPP PP P P + P PPP A P P P
Sbjct: 337 PPPPPPPRSNAA--GSIPLPPQGRSAPPPPPPRSA---------PSTGRQPPPLSSSRAV 385
Query: 786 XPPRAPPXXGPGXAXSLXPP 845
P APP PG + PP
Sbjct: 386 SNPPAPPPAIPGRSAPALPP 405
Score = 31.9 bits (69), Expect = 0.12
Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 6/80 (7%)
Frame = +3
Query: 606 PPPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXXAXPHXXYPXXPP--PXAPPXPX---- 767
PP P PP L P + P PP P PP P APP P
Sbjct: 415 PPVPTPPSLP---------PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA 465
Query: 768 PPPXXXXPPRAPPXXGPGXA 827
PP P PP P A
Sbjct: 466 APPLPPAAPAPPPAPAPAPA 485
Score = 31.1 bits (67), Expect = 0.21
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +3
Query: 609 PPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXX--AXPHXXYPXXPPPXAPPXPXPPPXX 782
PPP P T P PP + P P PP P PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 783 XXPPRAPPXXGPGXAXSLXPPSXP 854
P APP A PP+ P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 31.1 bits (67), Expect = 0.21
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = +3
Query: 594 PXLXPPPPXPPXLXFFFFXXFPX--PXXXXTXPXXPPPXX-AXPHXXYPXXPPPXAPPXP 764
P + PP PP P P P PP A P PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 765 XPPPXXXXPPRAP 803
PPP P AP
Sbjct: 475 APPPAPAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.28
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 4/71 (5%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXPHXXYPXXPPPX----APPXPXPPPXXXXPPRAPPXXGPGX 824
P P PP + P PPP A P PP PP PP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 825 AXSLXPPSXPR 857
P S R
Sbjct: 373 GRQPPPLSSSR 383
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Frame = +3
Query: 657 PXPXXXXTXPXXPP--PXXAXPHXXY-PXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGXA 827
P P P PP P A P PP P P PP P APP A
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 828 XSLXPPSXP 854
P P
Sbjct: 476 PPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 7/71 (9%)
Frame = +3
Query: 663 PXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXP-------PPXXXXPPRAPPXXGPG 821
P P P + P P P PP P P PP P AP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283
Query: 822 XAXSLXPPSXP 854
+ PP P
Sbjct: 284 INSTSKPPLPP 294
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +3
Query: 693 PPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGXAXSLXPPSXP 854
PP A P PP APP P PP P P SL PP+ P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 31.9 bits (69), Expect = 0.12
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXPHXXYPXXP--PPXAPPXP--XPPPXXXXPPRAPPXXGPGX 824
P P P PP + P P P APP P PPP P P P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS- 189
Query: 825 AXSLXPPSXPR 857
S PP P+
Sbjct: 190 LPSAVPPMPPK 200
Score = 27.9 bits (59), Expect = 2.0
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Frame = +3
Query: 600 LXPPPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXXAX-PHXXYPXXP---PPXAPPXPX 767
L PP PP P P P PP + P P P PP AP P
Sbjct: 137 LRPPTSAPPRPSI----PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPS 192
Query: 768 PPPXXXXPPRAPP 806
P PP+ PP
Sbjct: 193 AVP--PMPPKVPP 203
Score = 27.9 bits (59), Expect = 2.0
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Frame = +3
Query: 594 PXLXPPPPXP--PXLXFFFFXXFPXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPX 767
P PPP P P P PPP P P APP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGH 227
Query: 768 PPPXXXXPPRAPPXXGPGXAXSLXPPSXP 854
P P+ P GP + PP P
Sbjct: 228 APNVTSESPKF-PNRGPSIPSASVPPVPP 255
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.7 bits (81), Expect = 0.004
Identities = 29/94 (30%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Frame = +3
Query: 594 PXLXPPPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXXAXPHXXYPXXPPP------XAP 755
P PP P P + P P P P P A P P PP AP
Sbjct: 1079 PSGAPPVPAPSGIP-------PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Query: 756 PXPXP---PPXXXXPPRAPPXXGPGXAXSLXPPS 848
P P P PP APP P A + PS
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 36.3 bits (80), Expect = 0.006
Identities = 29/87 (33%), Positives = 29/87 (33%), Gaps = 4/87 (4%)
Frame = +3
Query: 594 PXLXPPPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXXAXPHXXYPXXPPPX-APPXPXP 770
P PP P P P P P PPP A P P P P APP P P
Sbjct: 1037 PSTAPPVPIPTSTP-------PVPKSSSGAPSAPPPVPA-PSSEIPSIPAPSGAPPVPAP 1088
Query: 771 ---PPXXXXPPRAPPXXGPGXAXSLXP 842
PP APP P A P
Sbjct: 1089 SGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 36.3 bits (80), Expect = 0.006
Identities = 26/73 (35%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXP----HXXYPXXPPPX-APPXPXP----PPXXXXPPRAPPX 809
P P P PPP A P P PPP APP P P PP +APP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPV 1239
Query: 810 XGP-GXAXSLXPP 845
P A S+ P
Sbjct: 1240 PAPSSEAPSVSTP 1252
Score = 33.9 bits (74), Expect = 0.030
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGXAXSL 836
P P P P P P P P PP PP PP P A +
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 837 XPPS 848
PS
Sbjct: 1220 PTPS 1223
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGXAXSL 836
P P P P P A P P PP P PP PP P A +
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPP-VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 837 XPPS 848
PS
Sbjct: 1124 PKPS 1127
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXA----XPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGP 818
P P P P P A P P P P + P P P PP PP P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 684 PXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGXAXSLXPP 845
P P P A P P PP P PP PP P PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.1 bits (62), Expect = 0.86
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXP--PPXXXXPPRAPPXXGPGXAX 830
P P P P P P P PP P P P P APP P A
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP---PVPAP 1069
Query: 831 SLXPPSXP 854
S PS P
Sbjct: 1070 SSEIPSIP 1077
Score = 29.1 bits (62), Expect = 0.86
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXA----XPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGX 824
P P P PPP A P P P P A P P P P + P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPS 1258
Query: 825 AXSLXPPS 848
S PS
Sbjct: 1259 PHSNASPS 1266
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 684 PXXPPPXXAXPHXXYPXXP-PPXAPPXPXPPPXXXXPPRAPPXXGPGXAXSLXPP 845
P P P A P P PP P PP P APP P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP-VPPPSEAPPVPKPSVGVPPVPP 1212
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGP 818
P P P P P A P P P P PP APP P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPP-VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.007
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 684 PXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGXAXSLXPPSXP 854
P PPP P P P P P P P PP PP G A PP P
Sbjct: 732 PPPPPPAVIVP------TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.49
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +3
Query: 657 PXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPPXXGPGXAXSL 836
P P P P P PPP PP PP PP G +
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 837 XP 842
P
Sbjct: 794 AP 795
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 140 PPLSXXPXPXPLXPXPXXXPTPPPFFXXXPTXXXXFXGGGXPPXP 274
PP P P P P P P P P G G PP P
Sbjct: 736 PPAVIVPTPAPA-PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.017
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 741 PPXAPPXPXPPPXXXXPPRAPPXXGPG 821
PP PP P PPP P + PP PG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 729 PXXPPPXAPPXPXPPPXXXXPPRAP 803
P PPP PP PP PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 684 PXXPPPXXAXPHXXYPXXPPPXAPP 758
P PPP P P PPP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 696 PPXXAXPHXXYPXXPPPXAPPXPXPP 773
PP P P PP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 729 PXXPPPXAPPXPXPPPXXXXPPRAPP 806
P PP PP P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.023
Identities = 20/43 (46%), Positives = 20/43 (46%)
Frame = -3
Query: 856 RGXEGGXREXAXPGPXXGGARGGXXXXGGGXGXGGAXGGGXLG 728
RG GG R A G GGARGG GG G G GG G
Sbjct: 25 RGGFGGGRGGARGG-GRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 31.1 bits (67), Expect = 0.21
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = -3
Query: 802 GARGGXXXXGGGXGXGGAXGGGXLGXXXCGXAXXGGGXXGXVXXXXGXGKXXKKKXXRXG 623
G+RGG GG G G GG G GGG G G G + G
Sbjct: 6 GSRGGR---GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Query: 622 GXGG 611
G GG
Sbjct: 63 GRGG 66
Score = 31.1 bits (67), Expect = 0.21
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 805 GGARGGXXXXGGGXGXGGAXGGGXLGXXXCGXAXXGGGXXG 683
GG+RGG GG G G GG G G GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 30.3 bits (65), Expect = 0.37
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 853 GXEGGXREXAXPGPXX-GGARGGXXXXGGGXGXGGAXGG 740
G GG R A G GGARGG G G GGA GG
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRG--GSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 0.86
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = -3
Query: 856 RGXEGGXREXAXPGPXX-GGARGGXXXXGGGXGXGGAXGGGXLGXXXCGXAXXGGGXXG 683
RG G R G GG RGG G G GG G G G + GG G
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.7 bits (66), Expect = 0.28
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -3
Query: 805 GGARGGXXXXGGGXGXGGAXGGGXLGXXXCGXAXXGGGXXGXVXXXXG 662
GG+RGG GG G GG G G G A G G V G
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNRGSVAPFSG 494
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.7 bits (66), Expect = 0.28
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -3
Query: 802 GARGGXXXXGGGXGXGGAXGGGXLGXXXCGXAXXGGGXXGXVXXXXGXGKXXKKKXXRXG 623
GAR G GG G G GG G GGG G G + + R G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRG---GFGGGSRGGSRGGFRGG 185
Query: 622 GXGG 611
GG
Sbjct: 186 SRGG 189
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 826 AXPGPXXGGARGGXXXXGGGXGXGGAXGGGXLGXXXCG-XAXXGGGXXG 683
A GP G RGG GG G G GG G G GGG G
Sbjct: 130 ARNGPAGRGGRGG--FRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = -3
Query: 856 RGXEGGXREXAXP---GPXXGGARGGXXXXGGGXGXGGAXGGGXLG 728
RG GG R G GG+RGG G GG GG G
Sbjct: 144 RGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 25.8 bits (54), Expect = 8.0
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = -3
Query: 805 GGARGGXXXXGGGXGXG--GAXGGGXLGXXXCGXAXXGGGXXG 683
GG RGG GG G G GGG G G GG G
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGF--GGGSRGGSRGG 181
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = +3
Query: 729 PXXPPPXAPPXPXPP---PXXXXPPRAPP 806
P PPP A P PP P PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 762 PXPPPXXXXPPRAPPXXGPGXAXSLXPPSXP 854
P PPP P PP P S PP+ P
Sbjct: 1882 PPPPPPMALPKAGPPSAAP---TSALPPAGP 1909
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Frame = +3
Query: 606 PPPPXPPXLXFFFFXXFPXPXXXXTXPXXPPPXXAXPHXXYPXXPPPXAP----PXPXPP 773
PPPP PP P P + P PP P P P PP
Sbjct: 189 PPPPPPPP---------PAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPP 239
Query: 774 PXXXXPPRAPP 806
P PP PP
Sbjct: 240 P--PPPPTLPP 248
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 684 PXXPPPXXAXPHXXYPXXPPPXAPPXPXPPP 776
P PP A P P P PP P PPP
Sbjct: 169 PSFQPPSAAAPATSLPSDYNP--PPPPPPPP 197
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +3
Query: 663 PXXXXTXPXXP-PPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPP 806
P P P P P+ P P P PP P P P PP
Sbjct: 92 PLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +3
Query: 684 PXXPPPXXAXPHXXYPXXPP-PXAPPXPXPPPXXXXPPRAP 803
P PP PH P PP P PPP P +P
Sbjct: 161 PPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPVSP 201
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/51 (29%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Frame = +3
Query: 657 PXPXXXXTXPXX-PPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAPP 806
P P P PPP + Y P A P PP APP
Sbjct: 178 PLPTASANAPLPVPPPRRVSQNSSYASGSVPAATAASTASPVKKPPPPAPP 228
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 22.2 bits (45), Expect(2) = 7.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 606 PPPPXPPXLXFFFFXXFPXP 665
PPPP PP F+ P P
Sbjct: 308 PPPPPPPSNDFWKDSNEPAP 327
Score = 21.8 bits (44), Expect(2) = 7.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 600 LXPPPPXPP 626
L PPPP PP
Sbjct: 305 LPPPPPPPP 313
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 693 PPPXXAXPHXXYPXXPPPXAPPXPXPPPXXXXPPRAP 803
PP P Y P P PP P P P P
Sbjct: 582 PPEPLLSPTIDYSATPFPLEPPPESPGPSLQIPSNNP 618
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,663,706
Number of Sequences: 5004
Number of extensions: 24075
Number of successful extensions: 472
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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