Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H12
(938 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0066 - 536281-537196,537397-537452 31 1.0
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.3
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 31 1.7
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 30 3.1
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 30 3.1
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 29 4.0
11_06_0610 - 25449085-25453284 29 4.0
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 29 4.0
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 29 4.0
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 4.0
03_01_0515 - 3864796-3865425 29 4.0
07_01_0080 + 587674-588510 29 5.3
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 5.3
04_03_0904 + 20717005-20718087 29 5.3
04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798 29 5.3
11_03_0063 + 9515666-9516656,9517503-9518599 29 7.1
10_08_0226 - 16001958-16002527 29 7.1
10_07_0154 + 13487971-13488168,13488259-13488483,13488592-134904... 29 7.1
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 29 7.1
09_02_0181 - 5425833-5426527,5426667-5429397 29 7.1
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 29 7.1
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 7.1
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 7.1
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 29 7.1
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 9.3
09_03_0007 - 11430123-11430513,11430605-11430794,11431114-114311... 28 9.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 9.3
07_01_0516 - 3850252-3852870 28 9.3
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 9.3
01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266 28 9.3
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/65 (30%), Positives = 23/65 (35%)
Frame = +1
Query: 616 P*PIIXCPXTXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPPXAPTRX 795
P P I P P P P S PT T+ P P P+ +R PP P
Sbjct: 216 PPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTPP---PIPTATVRPPPPLPRAT 272
Query: 796 HXXTP 810
TP
Sbjct: 273 VTPTP 277
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P AP P PPP PP P
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPP 341
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 649 PXPTPXPXR-YPSIAXSNXPTLTKLCPNXXXSXPTPST 759
P PTP P R PS + + PT + PN S P PS+
Sbjct: 151 PAPTPTPTRPAPSPSPTGPPTPSPTNPNLEPSPPPPSS 188
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +1
Query: 583 HXSXMIGDHXXP*PIIXCPXTXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTX 762
H S + H P ++ PTP P S A S+ P T L P + P P
Sbjct: 59 HPSLAVSHHTAP-VLLTTAAPALAPTPTPPPPSSTASSSLPPPTPLLPKHQQAPPPPPPT 117
Query: 763 LRXPPXAP 786
P P
Sbjct: 118 QSHQPPPP 125
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +1
Query: 622 PIIXCPXTXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPPXAPTR 792
P P P P P + P++ P T P P+ S + PP APTR
Sbjct: 84 PQASAPSPPHAPAPSPPQAPAMTPPQAPAPTP--PQAPRPAPSKSRAPQAPPPAPTR 138
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = +1
Query: 607 HXXP*PIIXCPXTXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPP 777
H P + P P P P P + P + + P + PTP + PP
Sbjct: 581 HPPSPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPTPPSVQTSPP 637
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 4.0
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = -3
Query: 363 KTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLS 220
K+L P A PVSLP +K SL P P +P S P V K+LPPP +S
Sbjct: 1262 KSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 29.5 bits (63), Expect = 4.0
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 191 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 367
SR H TW KQ GGK G G G G G R + TG Q YG V
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443
Query: 368 P--GGDSTNYGG 397
P G T +GG
Sbjct: 444 PTCSGGHTGFGG 455
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 29.5 bits (63), Expect = 4.0
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 191 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 367
SR H TW KQ GGK G G G G G R + TG Q YG V
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443
Query: 368 P--GGDSTNYGG 397
P G T +GG
Sbjct: 444 PTCSGGHTGFGG 455
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 740 PPXXXPXXYAPXP--XPPPAXTXXPPXP 817
PP P YAP P PPP + PP P
Sbjct: 423 PPPPPPGSYAPVPWGQPPPYASYPPPPP 450
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 713 PNYVLTXXXPPXXXPXXYAPXPXPPPAXTXXPPXP 817
P V + PP P P P PPP+ T PP P
Sbjct: 54 PPSVTSSPPPPAAGPLM--PPPPPPPSVTSSPPPP 86
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P +P P PPP PP P
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPP 119
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 380 STNYGGRLDWANKNAQATIDLNRQI 454
S+ +GG L W N + ++T+D +RQ+
Sbjct: 960 SSLHGGSLPWKNTDFESTVDFDRQL 984
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 643 TXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXP-PXAPT 789
T P PTP P Y P T P PTP T P P PT
Sbjct: 74 TPPKPTPTPPTYTPTPKPTPPPYTPK-PTPPAHTPTPPTYTPTPTPPKPT 122
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 713 PNYVLTXXXPPXXXPXXYAPXPXPPPAXTXXPPXP 817
P Y T PP P Y P P P PA P P
Sbjct: 110 PTYTPTPT-PPKPTPPTYKPQPKPTPAPYTPTPTP 143
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P P PPP+ T PP P
Sbjct: 334 PPTYTPTPTPPYHKPPPSYTPGPPPP 359
>04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798
Length = 575
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 32 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 166
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 469 LEALNLECEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 514
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 32 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 166
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 485 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 530
>10_08_0226 - 16001958-16002527
Length = 189
Score = 28.7 bits (61), Expect = 7.1
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +2
Query: 233 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGQA-YGTRVLGPGGDSTNYGGRLDW 409
G G G++ Q G G + G + G YGT G + GG
Sbjct: 91 GQGSSSGSVSQGG-GSASAGGGGGGVAGGQAGGVDGSGGYGTGTGSGTGSAAADGGASPT 149
Query: 410 ANK---NAQATIDLNRQIGGRSGMTASGSG 490
++ NA AT D N GG+SG + SG G
Sbjct: 150 SSPPYANANATGDGNGNGGGQSGGSGSGGG 179
>10_07_0154 +
13487971-13488168,13488259-13488483,13488592-13490492,
13490578-13490829,13491110-13491191,13491466-13491657
Length = 949
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = +1
Query: 607 HXXP*PIIXCPXTXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPP 777
H P + P P P P P + P + + P + P PS+ PP
Sbjct: 545 HPPSPPPLRSPPRQPTPPPSPSQQPPLPAPQPVQASPTSPAKQHAPPAPSSVQTSPP 601
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = +1
Query: 607 HXXP*PIIXCPXTXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPP 777
H P + P P P P P + P + + P + P PS+ PP
Sbjct: 424 HPSSPPPLRSPPRQPTPPPSPSQQPPLLAPQPVQASPTSPAKQHAPPAPSSVQTSPP 480
>09_02_0181 - 5425833-5426527,5426667-5429397
Length = 1141
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +2
Query: 185 QSSRRHPRDVTWDKQMGGGKVFGTLGQN-DDGLFGKAGYNREIFNDDRGKLTGQAYGTRV 361
QS RR + W K++GG + +N DDG G + G + T
Sbjct: 959 QSRRRAEKAAAWPKRLGGTGPCASRTENADDGAAGGGDGGSTWGGGSGAPMAGSGFPTHG 1018
Query: 362 LGPGGDSTNYGG 397
G G+ + GG
Sbjct: 1019 SGRRGERRDGGG 1030
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 32 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 166
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 542 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 587
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 7.1
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = +1
Query: 616 P*PIIXCPXTXPXPTPXPX---RYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPPXAP 786
P P + P T P P P P R+ I P L P PTP+ L PP AP
Sbjct: 63 PTPTVTTP-TPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPL-PPPPAP 120
Query: 787 TRXHXXTP 810
TP
Sbjct: 121 APPPTPTP 128
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +1
Query: 616 P*PIIXCPXTXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPPXAPT 789
P P P P P P P R PS + P +KL + S P P T + P T
Sbjct: 38 PPPPPPSPVPSPAPPPPPHR-PSPSPPPNPLSSKLWLSSKLSPPPPETLEQPEPSTTT 94
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 32 LKILTFGLEER-NLIQLKMNTNLFYIFATTLVCVNAEVYGPSDYAE 166
L+ L EER N +L N +++YI + + C+ + + P+ Y +
Sbjct: 259 LEALNLESEERINEYELSENIDIYYISNSNIECIGLQAFAPNWYRD 304
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 233 GGGKVFG-TLGQNDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDS-TNYGGRLD 406
G G G T+G +DDG K + + + G+ G A G R G GG N+G R D
Sbjct: 177 GAGAAHGKTIGLDDDGEEDKMDEDAKTPSKAAGRGRGGASGGRGRGGGGRGFMNFGERKD 236
Query: 407 WANK 418
+K
Sbjct: 237 PPHK 240
>09_03_0007 -
11430123-11430513,11430605-11430794,11431114-11431182,
11431601-11431727,11431843-11432083,11432519-11432596,
11433004-11433109,11433560-11433625,11437021-11437043,
11438106-11438177,11438256-11438394,11439505-11439919
Length = 638
Score = 28.3 bits (60), Expect = 9.3
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +2
Query: 149 PSDYAEDYSISGQSSRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRG 328
PS +A D I +S PR ++ D + + G + N L N + N G
Sbjct: 162 PSQFAWDGVICRNTSDNIPRIISLD--LSNSNLHGVISNNFTLLTALENLNNFVPNIAVG 219
Query: 329 KLTGQ---AYGTRVLGPGGDSTNYGGRLDW 409
K+ + G GGDS N +LDW
Sbjct: 220 KVKKDDMVSKGEVKKVKGGDSQNLDEKLDW 249
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P P P PPP PP P
Sbjct: 1184 PPPPLPSGPPPQPAPPPLPIQPPPIP 1209
>07_01_0516 - 3850252-3852870
Length = 872
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 713 PNYVLTXXXPPXXXPXXYAPXPXPPPAXTXXPPXP 817
P +L PP P P P PPPA PP P
Sbjct: 11 PPRLLPPQPPPTSRPLP-PPPPPPPPAHGPSPPPP 44
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P P P PPP PP P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPP 378
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P P P PPP PP P
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPPPP 379
>01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266
Length = 272
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 643 TXPXPTPXPXRYPSIAXSNXPTLTKLCPNXXXSXPTPSTXLRXPPXAPT 789
T P P P P + PS+ ++ P + P S P S PP T
Sbjct: 52 TSPAPLPAPAK-PSLPGASVPIIVPQAPPASVSVPIASDGFGPPPNTLT 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,298,513
Number of Sequences: 37544
Number of extensions: 450326
Number of successful extensions: 2601
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2421
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -