Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H12
(938 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 4.6
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 4.6
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 4.6
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 4.6
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 4.6
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 4.6
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 4.6
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 4.6
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 4.6
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 4.6
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 6.0
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.0
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 31 6.0
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.0
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.0
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.0
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.0
AL358781-4|CAI40217.1| 587|Homo sapiens KIAA0515 protein. 31 6.0
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 31 6.0
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 31 6.0
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 31 6.0
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 224 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P Y P PPP T PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVP 413
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P Y P PPP T PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVP 413
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 6.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 728 TXXXPPXXXPXXYAPXPXPPPAXTXXPPXP 817
T PP P AP P PPP PP P
Sbjct: 377 TLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P Y P PPP T PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVP 413
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P Y P PPP T PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVP 413
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P Y P PPP T PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVP 413
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P Y P PPP T PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVP 413
>AL358781-4|CAI40217.1| 587|Homo sapiens KIAA0515 protein.
Length = 587
Score = 31.1 bits (67), Expect = 6.0
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Frame = +2
Query: 161 AEDYSISGQSSRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG 340
+E S + RR D Q+ GG +LG+ + R + + KL
Sbjct: 111 SESSDFSERRERREGPGSEPDSQVDGGLSGASLGEKKELAKRSFSSQRPVVDRQSRKLEP 170
Query: 341 QAYGTRVLGPGGDSTN--YGGRLDWANKNAQATIDLNRQIGGRSGMTA-SGSGVWDLDKN 511
+G + + PGG T+ Y + + + + D GG SG ++ SG + L++
Sbjct: 171 GGFGEKPVRPGGGDTSPRYESQQNGTPLKVKRSPD-EALPGGLSGCSSGSGHSPYALERA 229
Query: 512 THFSA 526
H SA
Sbjct: 230 AHASA 234
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 6.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 728 TXXXPPXXXPXXYAPXPXPPPAXTXXPPXP 817
T PP P AP P PPP PP P
Sbjct: 377 TLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 31.1 bits (67), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 740 PPXXXPXXYAPXPXPPPAXTXXPPXP 817
PP P Y P PPP T PP P
Sbjct: 388 PPRPPPYGYQRGPLPPPRPTPRPPVP 413
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.1 bits (67), Expect = 6.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 728 TXXXPPXXXPXXYAPXPXPPPAXTXXPPXP 817
T PP P AP P PPP PP P
Sbjct: 377 TLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,967,479
Number of Sequences: 237096
Number of extensions: 2253989
Number of successful extensions: 9624
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8783
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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