Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_H11
         (928 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical...    78   1e-14
AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical...    29   3.6  
Z66564-4|CAA91476.1|  267|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    28   8.2  

>AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.1 protein.
          Length = 432

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 37/89 (41%), Positives = 59/89 (66%)
 Frame = +2

Query: 608 NPNNVPEQPYDLFFGKWISEGQRDLIRFHSLKKRKFIGNTSMDAQLXIVMANQXPIAPRH 787
           NP++  E P  ++FGK I EG+ +L   ++L+ R +IGNT+MD +L  + +N   I+P  
Sbjct: 151 NPSD--EAPKKVYFGKLIGEGRAELKTKYNLRDRCYIGNTTMDPELSFIQSNLAMISPGD 208

Query: 788 IVIDPFVGSGSWLIAXAHFGXYVWGSXID 874
           IV+DPFVG+G  ++  A FG +V G+ I+
Sbjct: 209 IVLDPFVGTGGLILPAAEFGAFVIGTEIN 237



 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 30/77 (38%), Positives = 43/77 (55%)
 Frame = +1

Query: 106 LLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRSVLM 285
           L+ F+  HVDFR AE  +I S+F I +   EK       +IV   S    +K+ SRS+L+
Sbjct: 5   LVIFSQSHVDFRIAEFEAICSMFSIKVDLSEKLNTTDHMFIVNFESHLEVRKLLSRSILV 64

Query: 286 KNCIELWSRAKSIDQLH 336
           K  IEL   A+S D ++
Sbjct: 65  KYAIELSIEAESYDIMY 81


>AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.12a protein.
          Length = 480

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +3

Query: 591 GVLWELILIMYLNNLMTCSLENGYLKVKGI*FGFIH*KNASSLGIQAWM 737
           GV W     M    L +  L   Y  V  + FG  H     S G+QAW+
Sbjct: 246 GVHWNFFFTMAAIRLSSSILPRCYPLVLSVIFGICHQTMLKSTGLQAWI 294


>Z66564-4|CAA91476.1|  267|Caenorhabditis elegans Hypothetical
           protein F52D10.5 protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -3

Query: 566 FFNLTDPFSG-KYVNSSILSSFSWIEKCLQNV-STSILNELLGEQHTSINSLGQICSAHS 393
           ++  +DP +    VN + +S+    +  L+NV  T  L EL+ ++H     +  I  + +
Sbjct: 108 YYRTSDPIASLARVNDAHMSTRQLAQSSLRNVLGTRSLAELMTDRHGIAVQVKYILDSAT 167

Query: 392 TFSKIHLEVVF*SDLR 345
            F  IH+E V   D+R
Sbjct: 168 LFWGIHVERVEIKDIR 183


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 116 NHNKYRRHILTSSTH*FHEFFVFXQN 39
           N N+Y  ++  S TH FH +FV  QN
Sbjct: 515 NFNQYSGYLNASDTHRFHYWFVESQN 540


>Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical
           protein ZK856.9 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 71  NVYLKLKCGGDIYYGSLTNTLISDMLKSIVFCPYSK 178
           NVY+++    + YYG +T++ I +M ++ V   + K
Sbjct: 296 NVYMEVHANPERYYGIITDSTILEMTRTRVVADFPK 331


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 116 NHNKYRRHILTSSTH*FHEFFVFXQN 39
           N N+Y  ++  S TH FH +FV  QN
Sbjct: 515 NFNQYSGYLNASDTHRFHYWFVESQN 540


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 116 NHNKYRRHILTSSTH*FHEFFVFXQN 39
           N N+Y  ++  S TH FH +FV  QN
Sbjct: 515 NFNQYSGYLNASDTHRFHYWFVESQN 540


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,438,543
Number of Sequences: 27780
Number of extensions: 449214
Number of successful extensions: 1080
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)