Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_H11
         (928 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   3.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   5.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   9.1  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 320 VLTNYILIYANHFKIPPLNGF 382
           +L +++ IYA    +PPL G+
Sbjct: 17  ILASFVWIYALSLSLPPLFGW 37


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 240 RELYNPIRLLQTRFLNEFDGYFE*GQNTIDFS 145
           R++YN +R        + D +++ G N I FS
Sbjct: 385 RQIYNMVRFRNLVKGTKIDNWWDNGSNQIAFS 416


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 505 KLDKIEEFTYLPLKGSV 555
           ++D  EE++YL LKG +
Sbjct: 284 RVDASEEYSYLRLKGQM 300


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 505 KLDKIEEFTYLPLKGSV 555
           ++D  EE++YL LKG +
Sbjct: 284 RVDASEEYSYLRLKGQM 300


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 679 FNSVSFIKKTQVHWEYKHGC 738
           FN+ S+ + T +H  + HGC
Sbjct: 83  FNAQSWQRLTSLHELHVHGC 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,639
Number of Sequences: 438
Number of extensions: 5575
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)