Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H06
(917 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 34 0.025
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.057
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.13
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.17
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.30
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 30 0.40
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.70
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.92
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.8
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 27 3.7
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 27 4.9
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 26 6.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.6
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 26 8.6
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +3
Query: 564 PXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXL 707
P P P T PP P PPPP PP P +PPP L
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP--MPAGPPSAPPPPL 1735
Score = 35.5 bits (78), Expect = 0.011
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 508 PXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPST 609
P PPPP P P P P PP A P P++
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 487 GQXXPXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXP 660
G P P PP PP P PPP P P + P P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 564 PXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXPP 716
P PP + Q P P PPP PPP P PP PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPS 606
P P PPP P P P P PPP PS
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGP-PSAPPPPLPASSAPS 1742
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXPXXP 687
PP P PP P P +PP P P++ S P P P PAP P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPP----VPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 33.5 bits (73), Expect = 0.043
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXPP 716
PP P G P + + P + PP P P P P PPP PP
Sbjct: 1169 PPVPAPSSGIPP--VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 32.7 bits (71), Expect = 0.075
Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = +1
Query: 472 KXTXRGQXXPXXPXXPPPPTXXXPRPPXPXPPXSPP-PAAXXPXPSTKXXXXXXKSXHPX 648
K + + P PP PP P P +PP P + PS S P
Sbjct: 1016 KLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPS 1075
Query: 649 XPXPXPAPXPXXP 687
P P AP P
Sbjct: 1076 IPAPSGAPPVPAP 1088
Score = 32.3 bits (70), Expect = 0.099
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
P PP P PP P P +PP P PS S P P P A P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPP----VPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/60 (26%), Positives = 19/60 (31%)
Frame = +1
Query: 508 PXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXPXXP 687
P P P+P PP P A P P+ K P P P+ P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
P PP P PP P P + PP P PS P P P AP
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPV---PAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 679 XXP 687
P
Sbjct: 1143 PKP 1145
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +1
Query: 508 PXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXPXXP 687
P PP P+P PP PPP+ P P+ P P PAP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPV-PPPSTAPPVPTPSAGLPPVPVPTAKAP-PVPAPSSEAP 1247
Score = 31.1 bits (67), Expect = 0.23
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 5/68 (7%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXP----PXSPPPAAXXPX-PSTKXXXXXXKSXHPXXPXPX 663
P PP P PP P P P P PAA P P K P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 664 PAPXPXXP 687
P+ P P
Sbjct: 1213 PSTAPPVP 1220
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 564 PXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPP--GPXTXXPXSPPPXLXPP 716
P P P + + PP P+ P PPP P + P P P PP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 PXXPPPPTXXXPRP-PXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXPXX 684
P P P P P P PP P A P P K P P P+ P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 685 P 687
P
Sbjct: 1162 P 1162
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
P PP PT PP P P PP P PS++ P +P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPV---PAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 29.1 bits (62), Expect = 0.92
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 8/60 (13%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQ---IXPPPP-----XXPPPGPXTXXPXSPPPXLXPP 716
PP P P PP P+ PP P P P P P PPP PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 29.1 bits (62), Expect = 0.92
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXP----PXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXPXX 684
PP P PP P P P PPP+ P P K P P P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP--KPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 685 P 687
P
Sbjct: 1227 P 1227
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPP--XPQIXPPPPXXPP-PGPXTXXPXSPPPXLXPP 716
PP PP P + PP P + P PP P P P P P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXPP 716
PP P P PP P PP P P P P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVP---PPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/58 (27%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 PXXPPPPTX-XXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
P PPP T P P PP P A P P+ + P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQ----IXP-PPPXXPPPGPXTXXPXSPPP 701
PP P G P PP P+ + P PPP PP P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.2 bits (55), Expect = 6.5
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXP----XPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXP 666
P PP P PP P P +PPP P PS++ S P P P P
Sbjct: 1035 PVPSTAPPVP-IPTSTPPVPKSSSGAPSAPPPV---PAPSSEIPSIPAPSGAP--PVPAP 1088
Query: 667 APXPXXP 687
+ P P
Sbjct: 1089 SGIPPVP 1095
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXPP 716
PP P P PP P P P P P P P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPV---PSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +1
Query: 520 PPPTXXXPRP-PXPXPPXSPPPAA--XXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
P P+ P P P PP P A P PS S P P P A P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPP 701
PP P P PP P + PPP PPPG P PPP
Sbjct: 736 PPAVIVPTPAPAPI--PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.3 bits (70), Expect = 0.099
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXP 666
PPPP P P P P PPPA P P P P P
Sbjct: 734 PPPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 437 PPRXLLXAPXXKKXPPAXXXSPXPLXPPPPP 529
PP ++ P PP + P PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 508 PXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
P PPP PP P PP A P P S + P P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY-YAPAPQAEPEP 803
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Frame = +3
Query: 603 LHQTXPPXPQIXPPPP-----XXPPPGPXTXXPXSPPP 701
L PP P + P P PPP P P PPP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +2
Query: 437 PPRXLLX--APXXKKXPPAXXXSPXPLXPPPPPXXXXPDPXXXXPP 568
PP ++ AP PP P PPPPP P PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = +3
Query: 576 PPRGGPXXSLHQTXPPXPQIXPPPPXX----PPPGPXTXXPXSPPPXLXPP 716
PP P + P + PP P PPP P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXP 713
PP P ++H PP Q PPP PP P PP P
Sbjct: 80 PPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPPPAYP 130
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.057
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQIXPP-PPXXPPPGPXTXXPXSPP 698
PP PPR + PP P PP P PPP SPP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 32.3 bits (70), Expect = 0.099
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 561 PPXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXPP 716
P PP + PP P I PP P PP P P P L PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI--PSSLPPP 174
Score = 29.5 bits (63), Expect = 0.70
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Frame = +1
Query: 499 PXXPXXPPP-PTXXXPRP--PXPXPPXSPPPA-AXXPXPSTKXXXXXXKSXHPXXPXPXP 666
P P PPP P P P P P PPPA P S + P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 667 APXPXXP 687
P P
Sbjct: 204 PPLSQAP 210
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 564 PXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPP-PXLXPP 716
P PP + PP P PPP P P P +P P PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPP--AQPAAPVKSPPSAPSLPSAVPP 196
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/65 (26%), Positives = 19/65 (29%)
Frame = +1
Query: 484 RGQXXPXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPX 663
R P P PP P P PP + P A PS P P P
Sbjct: 146 RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Query: 664 PAPXP 678
+ P
Sbjct: 206 LSQAP 210
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 571 SPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXPXXP 687
+PP A P P ++ P P P PA P P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Frame = +1
Query: 508 PXXPPPPTXXXP-RPPXPXPPXS---PP-PAAXXPXPS--TKXXXXXXKSXHPXXPXPXP 666
P P PPT RPP PP PP PA+ P PS P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 667 APXPXXP 687
P P
Sbjct: 185 PSAPSLP 191
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/60 (25%), Positives = 17/60 (28%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
P P P P + P P P PPP+ P S P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPP-XSPPPAAXXPXPST 609
P P PP P P PP PPP + P +T
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANT 214
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 547 PPXPXPPXSPPPAAXXPXP 603
P P PP +P PAA P P
Sbjct: 3 PAPPPPPPAPAPAAAAPAP 21
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +1
Query: 520 PPPTXXXPRPPXP-XPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAP 672
PP P P PP S PP P PS S P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPS-PASAPPIPSKAPPIPSSLPPP 174
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 712 GXRXGGGEXGXXVXGPGGGXXG-GGGXIWGXGG 617
G R GGG G + GP GG G GGG + G GG
Sbjct: 108 GPRIGGGHHG-PLHGPHGGFGGRGGGRMGGRGG 139
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 579 GGXXGGXXXWGSGXXXXGGG-GGXRGXGXXLXAGGXFLXXGAXRRXRGG 436
GG GG + G GGG GG RG G GG GA R RGG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA-RGGRGG 59
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -1
Query: 602 GXGXXAAGGGXXGGX--GXGGRGXXXVGGGGXXGXXG 498
G G A GG GG G GGRG G GG G G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = -2
Query: 715 GGXRXGGGEXGXXVXGPGGGXXGGGGXIWGXGGXVWWREXXGPPRGG 575
GG R G G G GGG G G G GG R G RGG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGG--GRGGARGGRGGRGGARGG 56
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -2
Query: 715 GGXRXGGGEXGXXVXGP-GGGXXGGGGXIWGXGGXVWWREXXGPPRGGXXXGGXV 554
GG G G G G GGG G G G GG R RGG G V
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKV 73
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 579 GGXXGGXXXWGSGXXXXGGGGGXRGXGXXLXAGGXFLXXGAXRRXRGG 436
GG GG +G G GGG G GG G RGG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXPS 606
P P PP P PP P +PPPA P P+
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAP-APAPA 485
Score = 29.9 bits (64), Expect = 0.53
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 7/70 (10%)
Frame = +1
Query: 499 PXXPXXPP--PPTXXXPRPPX-----PXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPX 657
P P PP PP+ PP P P PP A P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 658 PXPAPXPXXP 687
P PAP P P
Sbjct: 478 PAPAPAPAAP 487
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Frame = +2
Query: 383 PXPPXKXXTXXXXXXGGXPPRXLLXAPXXKKXPPAXXXSP-----XPLXPPPPPXXXXPD 547
P PP + PP + AP PP+ +P P PP PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 548 PXXXXPP 568
P P
Sbjct: 478 PAPAPAP 484
Score = 29.5 bits (63), Expect = 0.70
Identities = 19/77 (24%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Frame = +3
Query: 477 NXPRXXXPPXPSXXXXXXXXXXXXXXTXPPXXX--PPRGGPXXSLHQTXPPXPQIXPPPP 650
N R PP P+ + PP P P PP P P P
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Query: 651 XXPPPGPXTXXPXSPPP 701
PP P +P P
Sbjct: 468 PLPPAAPAPPPAPAPAP 484
Score = 29.1 bits (62), Expect = 0.92
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPX---SPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAP 672
PPPP P PP +PPP PST S P P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 561 PPXXXPPRGGPXXS-LHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPP 698
PP P R P L P PP PP P + P +PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +3
Query: 477 NXPRXXXPPXPSXXXXXXXXXXXXXX--TXPPXXXPPRGGPXXSLHQTXPPXPQIXPPPP 650
N R PP PS + PP PPR S+ P PQ PP
Sbjct: 307 NKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSI----PLPPQGRSAPP 362
Query: 651 XXPPPGPXTXXPXSPPP 701
PPP PPP
Sbjct: 363 -PPPPRSAPSTGRQPPP 378
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +3
Query: 600 SLHQTXPPX--PQIXPP-PPXXPPP--GPXTXXPXSPPPXLXP 713
S+ + PP P + P PP PPP G + P SPP + P
Sbjct: 235 SIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +3
Query: 576 PPRGGPXXSLHQTXPPXPQIXP-PPPXXPPPGPXTXXPXSPPPXLXPP 716
PP G + P P + P PP PP P + +P PP
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 547 PPXPXPPXSPPPAAXXPXPSTKXXXXXXKSXHPXXPXPXPAPXP 678
PP P PP PP A PS P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 499 PXXPXXPP-PPTXXXPRPPXPXPPXSPPPAAXXPXPS 606
P PP PP+ RPP P S P P PS
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPS 260
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/67 (25%), Positives = 19/67 (28%)
Frame = +3
Query: 498 PPXPSXXXXXXXXXXXXXXTXPPXXXPPRGGPXXSLHQTXPPXPQIXPPPPXXPPPGPXT 677
PP P + PP PPR P + PP PP P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPP-PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 678 XXPXSPP 698
P PP
Sbjct: 399 SAPALPP 405
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 520 PPPTXXXPRPPXPXPPXS-PPPAAXXPXPST 609
PPPT PR P P S PP++ P P T
Sbjct: 51 PPPTRRLPRKPLPFRSTSLQPPSSQPPAPPT 81
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 499 PXXPXXPPPPTXXXPRPPXPXPPXSPPP 582
P P PPPP P P P PP PPP
Sbjct: 6 PGNPPPPPPPPGFEP-PSQPPPP--PPP 30
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +3
Query: 627 PQIXPPPPXXPPPG--PXTXXPXSPPP 701
P PPPP PPPG P + P PPP
Sbjct: 5 PPGNPPPP-PPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 639 PPPPXXPPPGPXTXXPXSPPPXLXPP 716
PP PPP P P S PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 633 IXPPPPXXPPPGPXTXXPXSPPPXLXP 713
+ P P PPP P P PPP P
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Frame = +3
Query: 618 PPXPQIXPP--PPXXPPPG 668
PP P PP PP PPPG
Sbjct: 13 PPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 547 PPXPXPPXSPPPAAXXPXP 603
PP P PP PP+ P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +1
Query: 508 PXXPPPPTXXXPRPPXPXPPXSPPPA---AXXPXPSTKXXXXXXKSXHPXXP-XPXPAPX 675
P P P PP P PP PP + + P PS + P P P P
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPR 284
Query: 676 P 678
P
Sbjct: 285 P 285
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = +3
Query: 621 PXPQIXPPPPXXPPPG--PXTXXPX--SPPPXLXPP 716
P + PPP PP P T P +PPP PP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +3
Query: 576 PPRGGPXXSLHQTXPPXPQIXPPPPXXPPP 665
PP P + PPPP PPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +3
Query: 642 PPPXXPPPGPXTXXPXSPPPXLXPP 716
PP P P PPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 579 GGXXGGXXXWGSGXXXXGGGGGXRGXGXXLXAGG 478
GG GG +G G GGG G G G GG
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 579 GGXXGGXXXWGSGXXXXGGGGGXRG 505
GG GG +G G GGG G G
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 579 GGXXGGXXXWGSGXXXXGGGGGXRGXGXXLXAGG 478
GG GG + G GGG G G G GG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXPSTK 612
PPPP P P PP P P P K
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFK 343
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPP 236
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 517 PPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
PPPP P P PP P P P
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 606 HQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXPP 716
+Q PP P PP P GP + P S P PP
Sbjct: 1878 NQAAPPPP----PPMALPKAGPPSAAPTSALPPAGPP 1910
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 591 PXXSLHQTXPPXPQIXPPPPXXPPPGPXTXXPXSPPPXLXP 713
P ++ Q P+I P PP PPP P L P
Sbjct: 198 PIQNVAQHVSTLPKISPIPPSNPPPVPSVSYSQKQQKQLKP 238
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -2
Query: 220 FXGGLTDTXWFSQESSGXFSSKNTSQLSKIMPAS*QRPVQ-QLSFSIHSTTFFNKRQATN 44
F G L T + ++G + N S P S P +S S+HS T F+K Q +N
Sbjct: 441 FGGKLPTTYEETSSATGLLAYPNESHDIASEPFSISWPQNPSISGSVHSATTFDKAQLSN 500
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 102 CTGRCQLAGIIFDNCDV-FFEEXFPDDSWENXWVSVSPP 215
C G C L GII + E D +WE W+ PP
Sbjct: 1713 CEGACTL-GIIESPVGIKSVERAIIDKAWEEGWIVPRPP 1750
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 487 GQXXPXXPXXPPPPTXXXPRPPXPXPPXSPPPAAXXPXP 603
G P P P P +PP P + PP P P
Sbjct: 502 GVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFP 540
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 627 PQIXPPPPXXPPPGPXTXXPXSPPP 701
PQ+ P PP P P P PPP
Sbjct: 725 PQVTPAPP-TPAPTPAVKHHPPPPP 748
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 581 GGGXXGGXG-XGGRGXXXVGGGGXXGXXG 498
GGG GG G GGRG G GG G G
Sbjct: 446 GGGSRGGRGGFGGRGGFG-GRGGFGGGRG 473
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 99 CCTGRCQLAGIIFDNC-DVFFEEXFPDDSWE 188
C T +L G++ D+C +V + F D WE
Sbjct: 1293 CLTAWARLTGLLVDDCNEVISDVHFDDFIWE 1323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,927,199
Number of Sequences: 5004
Number of extensions: 32508
Number of successful extensions: 574
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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