Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_H02
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55374-7|AAP82641.1|  286|Caenorhabditis elegans Uncoordinated p...    30   2.6  
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p...    30   2.6  
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p...    30   2.6  
U23178-5|AAN63417.1|  439|Caenorhabditis elegans Vh1 dual-specif...    30   2.6  
U23178-4|AAK68300.1|  606|Caenorhabditis elegans Vh1 dual-specif...    30   2.6  
U23178-3|AAK68299.1|  657|Caenorhabditis elegans Vh1 dual-specif...    30   2.6  
AY585194-1|AAS91377.1|  657|Caenorhabditis elegans VH1-like phos...    30   2.6  
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ...    30   2.6  
AC024755-4|AAK84603.1|  225|Caenorhabditis elegans Hypothetical ...    29   4.5  

>U55374-7|AAP82641.1|  286|Caenorhabditis elegans Uncoordinated
           protein 2, isoform d protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 99  SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 218
           SHSH+    S      P Y+ S    P S+HS  TP+ S+
Sbjct: 181 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 220


>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
            protein 2, isoform c protein.
          Length = 1926

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 99   SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 218
            SHSH+    S      P Y+ S    P S+HS  TP+ S+
Sbjct: 1821 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1860


>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
            protein 2, isoform b protein.
          Length = 2027

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 99   SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 218
            SHSH+    S      P Y+ S    P S+HS  TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961


>U23178-5|AAN63417.1|  439|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform c
           protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 132 CPSQHPRYAPSSTPMPGSTHSDCTP 206
           CP + P+ A S+   PGSTH + +P
Sbjct: 188 CPPKVPKSASSNCVFPGSTHDESSP 212


>U23178-4|AAK68300.1|  606|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform b
           protein.
          Length = 606

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 132 CPSQHPRYAPSSTPMPGSTHSDCTP 206
           CP + P+ A S+   PGSTH + +P
Sbjct: 292 CPPKVPKSASSNCVFPGSTHDESSP 316


>U23178-3|AAK68299.1|  657|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform a
           protein.
          Length = 657

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 132 CPSQHPRYAPSSTPMPGSTHSDCTP 206
           CP + P+ A S+   PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367


>AY585194-1|AAS91377.1|  657|Caenorhabditis elegans VH1-like
           phosphatase 1 protein.
          Length = 657

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 132 CPSQHPRYAPSSTPMPGSTHSDCTP 206
           CP + P+ A S+   PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367


>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
            activated calciumchannel alpha-1 subunit protein.
          Length = 2027

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 99   SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 218
            SHSH+    S      P Y+ S    P S+HS  TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961


>AC024755-4|AAK84603.1|  225|Caenorhabditis elegans Hypothetical
           protein Y34B4A.9 protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 149 SLCTILDPHAWFDPQRLHPEVES 217
           ++ +I DP  WFDP+    EVE+
Sbjct: 40  AVLSISDPQPWFDPENFRKEVET 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,735,965
Number of Sequences: 27780
Number of extensions: 150852
Number of successful extensions: 526
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)