Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_H01
(948 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 28 0.28
07_01_0080 + 587674-588510 26 0.28
06_03_0743 + 24069752-24070483,24071890-24072345 26 0.47
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 26 0.56
06_03_0082 + 16363742-16364632 26 1.1
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 24 2.7
08_01_0060 - 413088-413999 26 5.0
04_03_1022 - 21778315-21779007 25 5.2
06_01_0008 + 141405-142421 29 5.4
02_01_0062 - 448105-448145,448780-448866,449664-449790 29 5.4
03_05_0067 - 20460206-20460703,20461255-20461530 24 6.6
04_01_0184 - 2085271-2085387,2085642-2085730,2086582-2086813,208... 29 7.1
01_01_0316 + 2565704-2566134,2566682-2566845,2566989-2567152,256... 24 8.4
01_06_1424 - 37269397-37270299 24 8.5
02_04_0382 - 22501041-22501279,22501717-22501810 28 9.4
02_05_0686 - 30900748-30902167,30903442-30904742 24 9.9
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect(2) = 1.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 682 PPPPPPPXFXXXFXXXXXGXGVPPXXFF 599
PPPPPPP F F PP F
Sbjct: 289 PPPPPPPAFPFPFPQLPPLPHFPPLPSF 316
Score = 27.1 bits (57), Expect(2) = 0.28
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3
Query: 682 PPPPPPPXFXXXF 644
PPPPPPP F F
Sbjct: 326 PPPPPPPSFPWPF 338
Score = 25.0 bits (52), Expect(2) = 0.28
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 694 FXKXPPPPPPP 662
F PPPPPPP
Sbjct: 316 FYPSPPPPPPP 326
Score = 21.8 bits (44), Expect(2) = 1.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 694 FXKXPPPPPPP 662
F PPPPPP
Sbjct: 284 FSPPSPPPPPP 294
>07_01_0080 + 587674-588510
Length = 278
Score = 26.2 bits (55), Expect(2) = 0.28
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 694 FXKXPPPPPPP 662
F + PPPPPPP
Sbjct: 88 FRRPPPPPPPP 98
Score = 25.8 bits (54), Expect(2) = 0.28
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 682 PPPPPPPXF 656
PPPPPPP F
Sbjct: 115 PPPPPPPLF 123
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 26.2 bits (55), Expect(2) = 0.47
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 682 PPPPPPPXFXXXFXXXXXGXGVPP 611
PPPPPPP + F PP
Sbjct: 27 PPPPPPPPYAASFSGLYSSYLHPP 50
Score = 25.0 bits (52), Expect(2) = 0.47
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 694 FXKXPPPPPPP 662
F PPPPPPP
Sbjct: 24 FPPPPPPPPPP 34
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.8 bits (54), Expect(2) = 0.56
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 688 KXPPPPPPPXFXXXFXXXXXGXGVP 614
K PPPPPPP G GVP
Sbjct: 687 KGPPPPPPPPLPP--ANRTNGPGVP 709
Score = 25.0 bits (52), Expect(2) = 0.56
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 694 FXKXPPPPPPP 662
F PPPPPPP
Sbjct: 662 FPAPPPPPPPP 672
>06_03_0082 + 16363742-16364632
Length = 296
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 682 PPPPPPPXF 656
PPPPPPP F
Sbjct: 169 PPPPPPPPF 177
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 688 KXPPPPPPP 662
+ PPPPPPP
Sbjct: 168 RPPPPPPPP 176
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 688 KXPPPPPPP 662
+ PPPPPPP
Sbjct: 364 RPPPPPPPP 372
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -3
Query: 682 PPPPPPPXFXXXFXXXXXGXGVPP 611
PPPPPP G VPP
Sbjct: 373 PPPPPPAVTQQQDVKTSCGPAVPP 396
>08_01_0060 - 413088-413999
Length = 303
Score = 25.8 bits (54), Expect(2) = 5.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 694 FXKXPPPPPPP 662
F + PPPPPPP
Sbjct: 26 FDQPPPPPPPP 36
Score = 21.8 bits (44), Expect(2) = 5.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 682 PPPPPPPXF 656
PPPPPP F
Sbjct: 35 PPPPPPLPF 43
>04_03_1022 - 21778315-21779007
Length = 230
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 682 PPPPPPPXF 656
PPPPPPP +
Sbjct: 39 PPPPPPPPY 47
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 694 FXKXPPPPPPP 662
F + PPPPPP
Sbjct: 11 FWRVEPPPPPP 21
>06_01_0008 + 141405-142421
Length = 338
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 331 PF-SGHFFFRLGKXVGPRXNGXPDPGLPHQTXNP 233
PF G F LG+ + P N P P LPH P
Sbjct: 35 PFCGGGFVEELGEDINPNPNPNPSPFLPHHPFFP 68
>02_01_0062 - 448105-448145,448780-448866,449664-449790
Length = 84
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 682 PPPPPPPXFXXXFXXXXXGXGVP 614
PPPPPPP F + G G P
Sbjct: 18 PPPPPPPFFPPQWAPPVPGGGGP 40
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 694 FXKXPPPPPPPXF 656
F PPPPPP F
Sbjct: 21 FQAGPPPPPPQYF 33
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -3
Query: 679 PPPPPPXFXXXFXXXXXGXGVPP 611
PPPPPP + G PP
Sbjct: 25 PPPPPPQYFQGAHPPAAMWGQPP 47
>04_01_0184 -
2085271-2085387,2085642-2085730,2086582-2086813,
2086898-2086990,2087046-2087204,2087298-2088134,
2088353-2088385
Length = 519
Score = 28.7 bits (61), Expect = 7.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 367 PKWGRNPGNWLKKFPQXFP 423
P WG + NW+ KFP P
Sbjct: 489 PDWGEDIPNWVSKFPSVIP 507
>01_01_0316 +
2565704-2566134,2566682-2566845,2566989-2567152,
2567594-2567720,2568347-2568450
Length = 329
Score = 24.2 bits (50), Expect(2) = 8.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 688 KXPPPPPPP 662
+ PPPPPPP
Sbjct: 52 RPPPPPPPP 60
Score = 22.6 bits (46), Expect(2) = 8.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 682 PPPPPPPXF 656
PPPPPP F
Sbjct: 55 PPPPPPSEF 63
>01_06_1424 - 37269397-37270299
Length = 300
Score = 24.2 bits (50), Expect(2) = 8.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 688 KXPPPPPPP 662
+ PPPPPPP
Sbjct: 41 RMPPPPPPP 49
Score = 22.6 bits (46), Expect(2) = 8.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 682 PPPPPPPXF 656
PPPPP P F
Sbjct: 45 PPPPPDPDF 53
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 838 PPXLXFXXGGGGFFXXXPPPP 900
PP + GGGG+ PPPP
Sbjct: 83 PPPSPYYGGGGGYGKPPPPPP 103
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 682 PPPPPPP 662
PPPPPPP
Sbjct: 364 PPPPPPP 370
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 688 KXPPPPPP 665
K PPPPPP
Sbjct: 342 KGPPPPPP 349
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,986
Number of Sequences: 37544
Number of extensions: 371567
Number of successful extensions: 8627
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7252
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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