Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_G24
(1000 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0594 - 24182946-24183641,24184122-24184476,24184553-241847... 35 0.12
01_06_1074 + 34318685-34319314,34319429-34319546,34319662-343198... 33 0.36
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 32 0.62
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 32 0.62
05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270... 32 0.62
02_02_0504 - 11014925-11014988,11015100-11015212,11015298-110153... 31 1.4
10_05_0075 + 8869087-8869413,8869823-8870053,8871145-8871267,887... 31 1.9
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 30 2.5
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154... 30 2.5
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 4.4
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 29 5.8
02_02_0508 - 11056682-11056791,11057010-11057056,11057461-110575... 29 5.8
06_01_0774 - 5789745-5790044 29 7.7
01_05_0457 + 22423998-22424039,22424139-22424415,22424540-224246... 29 7.7
>02_04_0594 -
24182946-24183641,24184122-24184476,24184553-24184743,
24184840-24185046
Length = 482
Score = 34.7 bits (76), Expect = 0.12
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +2
Query: 149 GVVEKQDFELAAQNIAKLRGWAPGSPAYDILQESMIAIWLGLXK---QADADGDGKVTQD 319
GV+ + L +N L +A G + ++ES++ WL K AD DGDG +
Sbjct: 295 GVLRRPTAGLPPENRTTLAFFAGGRHGH--IRESLLRHWLIGNKGGAAADGDGDGDMRVH 352
Query: 320 EWLALWDEYAKDPAAAKDWQNLLCKSIFQI 409
E+L ++Y AAA+ LC S F++
Sbjct: 353 EYLPAGEDYHAQMAAAR---FCLCPSGFEV 379
>01_06_1074 +
34318685-34319314,34319429-34319546,34319662-34319814,
34319906-34320021,34320135-34320302,34320424-34320551,
34320645-34320744,34320866-34320958
Length = 501
Score = 33.1 bits (72), Expect = 0.36
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 RKKKLSHVFTVF--FDSDKSGVVEKQDFELAAQNIAKLRGWAPGSPAYDILQESMIAIWL 268
R + H++T F FD D SG + K++ E A + +G G DI+ E
Sbjct: 418 RMDREEHLYTAFQYFDKDNSGCISKEELEQALRE----KGLLDGRDIKDIISE------- 466
Query: 269 GLXKQADADGDGKVTQDEWLAL 334
DAD DG++ E+ A+
Sbjct: 467 -----VDADNDGRIDYSEFAAM 483
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 32.3 bits (70), Expect = 0.62
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 551 PPHLAHXLXPXPTTPAXXXFXYLXPPTFDFVPP 649
PPH A P P+ P Y+ PP FD PP
Sbjct: 65 PPHFAAHAMPSPSPPPPHP-AYMHPPPFDSAPP 96
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 32.3 bits (70), Expect = 0.62
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 220 KPRLRHPTRKHDRHLAGIAETSRR*WRRKGYSGRMASSXGRVRQ 351
+ R RH R+HDRH E R +RR YS R GR R+
Sbjct: 300 RDRGRHKDREHDRH---AREDRDRDYRRSSYSSRNVDRQGRERR 340
>05_05_0298 -
23926266-23926442,23926573-23926632,23926822-23927029,
23927471-23927703,23928806-23928860,23928943-23929649
Length = 479
Score = 32.3 bits (70), Expect = 0.62
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = +2
Query: 131 FDSDKSGVVEKQDFELAAQNIAKLRGWAPGSPAYDILQESMIAIWLGLXKQADADGDGKV 310
+D+D+SG + K+ ELA+ A PG DI + + + Q DAD DGKV
Sbjct: 403 YDADRSGCISKE--ELASMLRALPEECLPG----DITEPGKLD---EVFDQMDADSDGKV 453
Query: 311 TQDEWLA 331
T DE+ A
Sbjct: 454 TFDEFKA 460
>02_02_0504 -
11014925-11014988,11015100-11015212,11015298-11015378,
11015807-11015874,11016223-11016381,11016479-11016542,
11016656-11016738,11017297-11017461,11017913-11017964
Length = 282
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 278 KQADADGDGKVTQDEWLALWDEYAKDPAAAKD 373
KQAD + DGK+ DEW A +K+PA K+
Sbjct: 227 KQADLNSDGKIDPDEWKAF---ASKNPALLKN 255
>10_05_0075 +
8869087-8869413,8869823-8870053,8871145-8871267,
8871873-8872091
Length = 299
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 223 PRLRHPTRKHDRHLAGIAETSRR*WRRKGYSGRMASSXGRVRQGPSCSKGLA 378
PR R P R+H RHL + R + R+G G S+ G + G S + A
Sbjct: 25 PRAR-PPRRHRRHLHQASSGRRCCYGRRGVVGAAQSTGGHIPAGSSSAAAYA 75
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 RKKKLSHVFTVF--FDSDKSGVVEKQDFELAAQNIAKLRGWAPGSPAYDILQESMIAIWL 268
R + H++T F FD D SG + ++ E A + +G G DI+ E
Sbjct: 464 RMDREEHLYTAFQYFDKDNSGYITIEELEQALRE----KGLMDGREIKDIISE------- 512
Query: 269 GLXKQADADGDGKVTQDEWLAL 334
DAD DG++ E++A+
Sbjct: 513 -----VDADNDGRINYTEFVAM 529
>01_07_0179 -
41814886-41815074,41815172-41815222,41815365-41815469,
41815852-41815945,41816056-41816150,41816581-41816700,
41816737-41816832,41817272-41817569,41817777-41817853,
41818932-41819447
Length = 546
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 281 QADADGDGKVTQDEWLALWDEYAKDPAAAKDWQNLLCKSIFQIQDSSXDGSXXVXHXVTV 460
+ADADGDG ++ DE+ AL + D AA + ++L + F++ D+ +G+ V
Sbjct: 83 EADADGDGFISLDEFAALNATASGDAAAVE--EDL--RHAFRVFDADGNGTISAAELARV 138
Query: 461 XXSL 472
L
Sbjct: 139 LHGL 142
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 266 LGLXKQADADGDGKVTQDEWLALWDEYAKDPAAAKDWQN 382
LGL +++ + G+V D + D + +P AKDW +
Sbjct: 786 LGLVAESEVEEFGEVAADTEAGVVDNLSPEPLGAKDWSS 824
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 502 PXPXXXKVTTPXSXPDSTXPRAXTXSPXHXPXXXP 606
P P TP P T PRA T +P P P
Sbjct: 173 PPPPQAPAPTPPQAPAPTPPRAPTPTPPQAPLPAP 207
>02_02_0508 -
11056682-11056791,11057010-11057056,11057461-11057573,
11057724-11057804,11058186-11058253,11058359-11058515,
11058644-11058703,11058806-11058888,11058915-11059029
Length = 277
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 278 KQADADGDGKVTQDEWLALWDEYAKDPAAAKD 373
KQAD + DGK+ DEW +K+PA K+
Sbjct: 191 KQADLNDDGKIDPDEWKTF---ASKNPALLKN 219
>06_01_0774 - 5789745-5790044
Length = 99
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 263 WLGLXKQADADGDGKVTQDE 322
WLG Q DADGDG++++DE
Sbjct: 22 WLG---QFDADGDGRISRDE 38
>01_05_0457 +
22423998-22424039,22424139-22424415,22424540-22424622,
22425378-22425437,22425610-22425718,22425805-22425857,
22425953-22426033,22426125-22426237,22426421-22426475
Length = 290
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 242 QESMIAIWLGLXKQADADGDGKVTQDEW 325
+E + AI + ADAD DGK+ Q EW
Sbjct: 226 EELLEAIIDKTFEDADADRDGKINQQEW 253
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,997,219
Number of Sequences: 37544
Number of extensions: 359442
Number of successful extensions: 1103
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2928685000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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