Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_G18
         (966 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    36   0.006
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    33   0.060
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    31   0.24 
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    30   0.42 
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po...    29   0.74 
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch...    29   0.98 
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    29   0.98 
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    28   1.7  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    28   2.3  
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr...    28   2.3  
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    27   5.2  
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch...    26   6.9  
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl...    26   9.1  

>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 273

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 25/74 (33%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
 Frame = -2

Query: 836 GXVGXXFXXXEGXGXXXPPGXXGEXKXGX--GXXVXGXXXGGEGGXXGGXEXGPGXXXXX 663
           G  G  F    G     PPG  G    G   G        GG GG  GG E GPG     
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243

Query: 662 XXVXXXXXGGXGGG 621
                   GG GGG
Sbjct: 244 PGGFGGGLGGFGGG 257



 Score = 33.1 bits (72), Expect = 0.060
 Identities = 29/105 (27%), Positives = 29/105 (27%)
 Frame = -2

Query: 935 GXGGXAXXGXXXXXXXXXXXXXXXXXXGXGXXXGXVGXXFXXXEGXGXXXPPGXXGEXKX 756
           G GG A  G                  G G   G  G       G G     G  G    
Sbjct: 162 GLGGLALGGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG 221

Query: 755 GXGXXVXGXXXGGEGGXXGGXEXGPGXXXXXXXVXXXXXGGXGGG 621
           G G    G   GG  G  GG   GPG             GG GGG
Sbjct: 222 GHGGF--GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 33.1 bits (72), Expect = 0.060
 Identities = 20/72 (27%), Positives = 22/72 (30%)
 Frame = +1

Query: 622 PPPXPPXXXXXTSXXXXKXPGPXSXPPXXPPSPPXXNPXTXXPXPXFXSPXXPGGXXXPX 801
           PPP PP      S      P P       PP PP   P T    P   S         P 
Sbjct: 337 PPPPPPPR----SNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392

Query: 802 PSXXXKXXPTXP 837
           P+   +  P  P
Sbjct: 393 PAIPGRSAPALP 404



 Score = 31.1 bits (67), Expect = 0.24
 Identities = 17/59 (28%), Positives = 18/59 (30%)
 Frame = +1

Query: 679 PGPXSXPPXXPPSPPXXNPXTXXPXPXFXSPXXPGGXXXPXPSXXXKXXPTXPXXXPXP 855
           P P S PP  PPS P   P +         P  P     P         P  P   P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476



 Score = 25.8 bits (54), Expect = 9.1
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +1

Query: 685 PXSXPPXXPPSPPXXNPXTXXPXPXFXSPXXP 780
           P   PP  PPS P   P +  P     +P  P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 31.1 bits (67), Expect = 0.24
 Identities = 28/120 (23%), Positives = 29/120 (24%), Gaps = 5/120 (4%)
 Frame = +1

Query: 622  PPPXPPXXXXXTSXXXXKXPGPXSXPPXXPPSPPXXNPXTXXPXPXFXSPXXP---GGXX 792
            PPP P       S        P   P   PP P         P P    P  P   G   
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122

Query: 793  XPXPSXXXK--XXPTXPXXXPXPXXXXXXXXXXXXXXXXXXPXXAXPPXPPRPXXXPSHP 966
             P PS        P+     P P                  P  A PP P      P  P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182


>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1367

 Score = 30.3 bits (65), Expect = 0.42
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 335 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 219
           NF    ++P  STR+R  + +R   G +H+IC   D  +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794


>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 658

 Score = 29.5 bits (63), Expect = 0.74
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +1

Query: 130 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 294
           PT++ T T ++ T  T   + +TTT+      + T +  T T P  + T+ LP++
Sbjct: 102 PTVETTTTPMVETT-TITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155


>SPBC21D10.06c |map4||cell agglutination protein
           Map4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 948

 Score = 29.1 bits (62), Expect = 0.98
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +1

Query: 148 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 297
           A+ L +++ T+ + P  +T  ET ++ S+    T T+  +  TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281


>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 29.1 bits (62), Expect = 0.98
 Identities = 19/72 (26%), Positives = 22/72 (30%), Gaps = 3/72 (4%)
 Frame = +1

Query: 622 PPPXPPXXXXXT---SXXXXKXPGPXSXPPXXPPSPPXXNPXTXXPXPXFXSPXXPGGXX 792
           PPP PP     T   +      P P    P  PP PP        P P        GG  
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791

Query: 793 XPXPSXXXKXXP 828
              P+   +  P
Sbjct: 792 YYAPAPQAEPEP 803



 Score = 26.2 bits (55), Expect = 6.9
 Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
 Frame = +1

Query: 709 PPSPPXXNPXTXXPXPXFXSPXXP--GGXXXPXPSXXXKXXPTXPXXXPXP 855
           PP PP     T  P P    P  P  GG   P P          P   P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783


>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = +3

Query: 195 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 299
           DYN N  N Y PI N  Y+++   G    PYF     PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +1

Query: 622 PPPXPPXXXXXTSXXXXKXPGPXSXPPXXPPSPPXXNPXTXXPXPXFXSPXXP 780
           PPP P       S      P P S PP   P+ P  +P +    P    P  P
Sbjct: 150 PPPSPASAPPIPSKAP---PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199



 Score = 27.5 bits (58), Expect = 3.0
 Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 4/82 (4%)
 Frame = +1

Query: 622 PP--PXPPXXXXXTSXXXXKXPGPXSXPPXXPPSPPXXN--PXTXXPXPXFXSPXXPGGX 789
           PP  P PP             P P   PP    +PP  +  P      P    P  P   
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183

Query: 790 XXPXPSXXXKXXPTXPXXXPXP 855
               PS      P  P   P P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205


>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 305

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
 Frame = -1

Query: 855 GXRXXGXGGXXGFXXXXGXXXXXPPXXRGXXEX--RXGXXXXGVXXRGGRGGRXGXXXGA 682
           G R    GG  GF    G         RG      R G    G   RGGRGG  G   GA
Sbjct: 9   GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG-GARGGRGGSSGGRGGA 67


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
            Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 221  RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 328
            R + ++C  R P  RP  +     PW + +  K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315


>SPAC29B12.10c |||OPT oligopeptide transporter
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 851

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +1

Query: 115 LCWLWPTLKETATNLLTTARTSL-ILPKTTTLMETATNLSTTVHITWTV 258
           LCW+WP  K    N L    + L ILP T    +   N +      W +
Sbjct: 361 LCWIWP--KNRVVNQLFGYNSGLGILPLTFDWQQVVYNSNPLASPWWVI 407


>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
           Plh1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 623

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 KDYNPNGNGYEPIDNGAYYVDRPQGRP 272
           K Y  +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,431,490
Number of Sequences: 5004
Number of extensions: 46114
Number of successful extensions: 214
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 495302128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)