Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_G16
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   3.9  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   9.0  

>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +1

Query: 772 PQPPGXXRFXXLGPLPXSXPNDPXPPXLXVGXXGIXPPQGGNXVXPKP 915
           P PP   +F   GP P      P PP +        PP G N   P P
Sbjct: 62  PPPPHQPQFN-FGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPP 108


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = +1

Query: 772  PQPPGXXRFXXLGPLPXSXPNDPXPPXLXVGXXGIXPPQGGNXVXPKPG 918
            P PP       +G  P + P  P PP       G  PP GG  +   PG
Sbjct: 1184 PPPPPPRGHGGVGG-PPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPG 1231


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,035,054
Number of Sequences: 37544
Number of extensions: 252389
Number of successful extensions: 381
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)