Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_G13
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 111 1e-25
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 110 2e-25
SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces ... 29 0.67
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 29 1.2
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 27 3.6
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 26 8.3
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 111 bits (267), Expect = 1e-25
Identities = 62/135 (45%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Frame = +2
Query: 284 LAKPVSLMLCIMHLTMNWCVQ-RPLXKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTE 460
++K ++ H + N V+ L K+AIV +DA PFR WYE+HY + +G KG K T
Sbjct: 72 VSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG-SKGKKATS 130
Query: 461 AEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILE 640
+S+ RK+ AR +KV+ ALE QF GRL A V+SRPGQ GR DGYILE
Sbjct: 131 TPNP-----KSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILE 185
Query: 641 GKELEFYLRKIKSKR 685
G+EL FYLR++ K+
Sbjct: 186 GEELHFYLRRMAPKK 200
Score = 80.6 bits (190), Expect = 3e-16
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +1
Query: 205 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 354
R RGGN K+RALRLD+GNFSWGSE ++KTRII V Y+ SNNELVRT TL
Sbjct: 47 RVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTL 96
Score = 69.7 bits (163), Expect = 5e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3
Query: 66 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 197
MGI+RD HKR ATG KRA RKKRK+ELGR +NTR+GP+RIH
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIH 44
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 110 bits (265), Expect = 2e-25
Identities = 62/135 (45%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Frame = +2
Query: 284 LAKPVSLMLCIMHLTMNWCVQ-RPLXKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTE 460
++K ++ H + N V+ L K+AIV +DA PFR WYE+HY + +G KG K T
Sbjct: 72 VSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG-SKGKKATA 130
Query: 461 AEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILE 640
+S+ RK+ AR +KV+ ALE QF GRL A V+SRPGQ GR DGYILE
Sbjct: 131 TPTP-----KSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILE 185
Query: 641 GKELEFYLRKIKSKR 685
G+EL FYLR++ K+
Sbjct: 186 GEELHFYLRRMAPKK 200
Score = 80.6 bits (190), Expect = 3e-16
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +1
Query: 205 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 354
R RGGN K+RALRLD+GNFSWGSE ++KTRII V Y+ SNNELVRT TL
Sbjct: 47 RVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTL 96
Score = 69.7 bits (163), Expect = 5e-13
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3
Query: 66 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 197
MGI+RD HKR ATG KRA RKKRK+ELGR +NTR+GP+RIH
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIH 44
>SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 655
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 662 DRTRVLCLLRCNHRRDHTDLGDSPRKPANAPCGIALLE 549
D + CLLR H+RD + + RK N G LLE
Sbjct: 434 DANIIPCLLRSKHKRDKANPENKERKLVNNLLGAQLLE 471
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -2
Query: 250 CPDAAHGT*YF--HHVNEXEWIR*GPSLVFAAGRPNSYFLFLRMGARFPPV 104
CPD + G Y V + ++R PS+++A ++ LF+R+ ++PP+
Sbjct: 307 CPDPSQGFNYCIREAVFQGYFVRPLPSIIWALFEFSAVALFIRLKMKYPPL 357
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = +2
Query: 383 ATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQ 562
+TP + H KKG+K+ A++ ++R + AR+ A + K ++E+
Sbjct: 754 STPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRARRQTALEESLKAPISIEDA 813
Query: 563 FHTGRLLACVASR 601
+LA + +
Sbjct: 814 TDPQTILAILKQK 826
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 54 DPTKMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAAN 170
+ TK G + RRA A RKK K + GRP +N
Sbjct: 3 ETTKSGSKKSGQTSRRAIHSCLACRRKKLKCDHGRPCSN 41
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,975,882
Number of Sequences: 5004
Number of extensions: 56468
Number of successful extensions: 149
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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