Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_G12
(987 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.08c |rpl3401|rpl34, rpl34-1|60S ribosomal protein L34|S... 81 2e-16
SPCC1322.15 |rpl3402|rpl34, rpl34-2|60S ribosomal protein L34|Sc... 77 4e-15
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.009
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 35 0.020
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.035
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.035
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.19
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.25
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.25
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.33
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.49
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.76
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.1
SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces pom... 27 3.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.1
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 7.1
>SPAC23A1.08c |rpl3401|rpl34, rpl34-1|60S ribosomal protein
L34|Schizosaccharomyces pombe|chr 1|||Manual
Length = 112
Score = 81.0 bits (191), Expect = 2e-16
Identities = 41/71 (57%), Positives = 47/71 (66%)
Frame = +1
Query: 175 YQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVR 354
Y ++KK IPRCG L+GI RP E +RL + KKTV+R YGG L VK RIVR
Sbjct: 32 YLHIKKLGTIPRCGDTGVPLQGIPALRPREFARLSHNKKTVQRAYGGCLSANAVKDRIVR 91
Query: 355 AFLIEEQXIVK 387
AFLIEEQ IVK
Sbjct: 92 AFLIEEQKIVK 102
Score = 47.6 bits (108), Expect = 3e-06
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +3
Query: 81 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRL 170
M QR+T+RRRL+YNT+SN+ RI++TPG +
Sbjct: 1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNI 30
>SPCC1322.15 |rpl3402|rpl34, rpl34-2|60S ribosomal protein
L34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 111
Score = 77.0 bits (181), Expect = 4e-15
Identities = 39/71 (54%), Positives = 46/71 (64%)
Frame = +1
Query: 175 YQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVR 354
Y ++KK IPRCG L+GI RP E +RL + +K V+R YGG L VK RIVR
Sbjct: 32 YLHIKKLGTIPRCGDTGVPLQGIPALRPREFARLSHNQKKVQRAYGGCLSANAVKDRIVR 91
Query: 355 AFLIEEQXIVK 387
AFLIEEQ IVK
Sbjct: 92 AFLIEEQKIVK 102
Score = 47.6 bits (108), Expect = 3e-06
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +3
Query: 81 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRL 170
M QR+T+RRRL+YNT+SN+ RI++TPG +
Sbjct: 1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNI 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.9 bits (79), Expect = 0.009
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 871 GXGEXGXXGGSGGXXRXGVGGR-XXXGGKXGRXXGGGGAXG 752
G G G GG G R G GGR GG+ G G GGA G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 30.7 bits (66), Expect = 0.33
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 874 GGXGEXGXXGGSGGXXRXGV-GGRXXXGGKXGRXXGGGGAXG 752
G G G GG+ G R G GGR GG G G G G
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 29.9 bits (64), Expect = 0.58
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -3
Query: 865 GEXGXXGGSGGXXRXGVGGRXXXGGKXGRXXGGGGAXGXGX*XGNXVXG 719
G G GG GG G GG GG+ GR GG G G G
Sbjct: 24 GRGGFGGGRGGARGGGRGGAR--GGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 29.5 bits (63), Expect = 0.76
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 865 GEXGXXGGSGGXXRXGVGGRXXXGGKXGRXXGG--GGAXG 752
G G GGS G GGR GG G GG GGA G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 29.5 bits (63), Expect = 0.76
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = -3
Query: 856 GXXGGSGGXXRXGVGGRXXXGGKXGRXXGGGGAXGXG 746
G GG GG R G GG GG+ G G GGA G G
Sbjct: 6 GSRGGRGGS-RGGRGG--FNGGRGGFGGGRGGARGGG 39
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 34.7 bits (76), Expect = 0.020
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -3
Query: 871 GXGEXGXXGGSGGXXRXGVGGRXXXGGKXGRXXGG 767
G G G GG GG R G GGR GG GR GG
Sbjct: 446 GGGSRGGRGGFGG--RGGFGGRGGFGGGRGRGRGG 478
Score = 29.1 bits (62), Expect = 1.0
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3
Query: 847 GGSGGXXRXGVGGRXXXGGKXGRXXGGGGAXGXG 746
GGS G R G GGR GG+ G GGG G G
Sbjct: 447 GGSRGG-RGGFGGRGGFGGRGG--FGGGRGRGRG 477
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 841 SGGXXRXGVGGRXXXGGKXGRXXGGGG 761
+GG R G GG GG GR GGG
Sbjct: 445 TGGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.035
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 735 PXXFPXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P APP PP +PP P PP+P P +P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPP--SAPPMPAGPPSAPPPP 1734
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 720 PXTXXPXXFPXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXP 872
P + P P PPPP PP PP P PP P S P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMS---VPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +3
Query: 720 PXTXXPXXFPXPXA-PPPPXXRPFX--PPXHXLPPTPXRXXPPLP 845
P P P P + PPPP P PP PP P P +P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.035
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 753 PXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P APP P P PP P PPLPP P P P
Sbjct: 444 PAAPPLPPSAPIAPPL----PAGMPAAPPLPPAAPAPPPAP 480
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +3
Query: 702 PP*XXXPXTXXPXXFPXPXAPP--PPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
PP T P P PP PP P PP P PPLPP P +P P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSL---PMGAPAAPPLPPSAPIAPPLP 460
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 753 PXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSP 866
P APP P P PP P P PP P P +P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAP----PPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 759 APPPPXXRPFXPPXHXLPPTPXRXXPPLPP 848
APP P P P +P PP+PP
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 25.8 bits (54), Expect = 9.4
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Frame = +3
Query: 651 PXPXDGLLXXXGXXXXXPP*XXXPXTXXPXXFPXPXAPPPPXX--RPFXPPXHXLPPTPX 824
P P G P P P P PPP R P P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 825 RXXPPLPP 848
R P LPP
Sbjct: 398 RSAPALPP 405
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 720 PXTXXPXXFPXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXP 857
P P P P PPP PP PP PP PP P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.0
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Frame = +3
Query: 762 PPPPXX---RPFXPPXHXLPPTPXRXXPPLPPXXP----XSPXPP 875
PPPP P P PP P PP PP P P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 783 PFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P PP + PTP P+PP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.25
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = -3
Query: 874 GGXGEXGXXGGSGGXXRXGVGGRXXXGGKXGRXXG-GGGAXGXGX*XGNXVXGXXXYGG 701
GG G G GG G G GG G G GGG G G G G +GG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -3
Query: 874 GGXGEXGXXGGSGGXXRXGVGGRXXXGGKXGRXXGGGGAXGXG 746
G G G GG G G+GG GG G G GG G G
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGG--FGGGPGGFGGGPGGHGGPG 272
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +3
Query: 702 PP*XXXPXTXXPXXFPXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXP 872
PP P T P APP P P P PP P + PP+P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP--PSPASAPPIPSK-APPIPSSLPPPAQP 177
Score = 30.3 bits (65), Expect = 0.44
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 759 APPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXP 872
A PP P P PPT P +PP P S P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 29.9 bits (64), Expect = 0.58
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 720 PXTXXPXXFPXPXAPPP-PXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXP 872
P T P P P PPP P P P PP P PP P P P
Sbjct: 139 PPTSAP---PRPSIPPPSPASAP--PIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 747 PXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P + PPP +P P PP+ +PP P P PP
Sbjct: 166 PIPSSLPPPA-QPAAPVKS--PPSAPSLPSAVPPMPPKVPPPP 205
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 753 PXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P P P PP PP P + +PP P S PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVP-KPSVGVPPVPPPSTAPP 1218
Score = 30.3 bits (65), Expect = 0.44
Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Frame = +3
Query: 651 PXPXDGLLXXXGXXXXXPP*XXXPXTXXPXXFPX---PXAPPPPXXRPFXPPXHXLP--P 815
P P G+ PP P P P P PPP P P LP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPP-VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Query: 816 TPXRXXPPLPPXXPXSP 866
P PP+P +P
Sbjct: 1231 VPTAKAPPVPAPSSEAP 1247
Score = 29.5 bits (63), Expect = 0.76
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 735 PXXFPXPXAPPPPXXRPFXPPXHXLP--PTPXRXXPPLPPXXPXSPXPP 875
P P P P P PP P PTP PP+P +P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 753 PXAPPPPXXRPFXP-PXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P P P P P +PP P + +PP P S PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAPP 1199
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 753 PXAPPPPXXRPFXPPXHXLPPTPX-RXXPPLPPXXPXSPXPP 875
P PPP P P +PP P PP+P P + PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP--TPSAGLPP 1228
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 656 PPRRPIAXXWXPPXX-PPIXXXPXHPIXLSXSXSPRSPXPXXPP 784
PP P++ P PP P P+ S SP +P PP
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPP 1013
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +3
Query: 753 PXAPPPPXXRPFXPPXHXLP--PTPXRXXPPLP-PXXPXSPXPP 875
P P P P P P P P PP+P P P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 753 PXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P P P P PP P P P S PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect(2) = 0.49
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 702 PP*XXXPXTXXPXXFPXPXAPPPP 773
PP P T P + P PPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
Score = 22.6 bits (46), Expect(2) = 0.49
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 8/51 (15%)
Frame = +3
Query: 747 PXPXAPPPPXXRPFXPPXHXLPPTPXRXXP--------PLPPXXPXSPXPP 875
P P PPPP P L P P R P PP P P P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQL-PMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.76
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 874 GGXGEXGXXGGSGGXXRXGVGGRXXXG-GKXGRXXGGGGAXG 752
G G G GG GG R G GG G G R GGG+ G
Sbjct: 136 GRGGRGGFRGGRGGS-RGGFGGNSRGGFGGGSRGGFGGGSRG 176
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 747 PXPXAPPPPXXRPFXPPXHXLPPTP 821
P PPPP F PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 747 PXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P A P P P +P P P PP P P P
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVP 677
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 747 PXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P P P P P P P PP P +P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVP 617
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 747 PXPXAPPPPXXRPFXPPXHXLPPTPXRXXPPLPPXXPXSPXPP 875
P P P P P +P P P PP P P P
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVP 647
>SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 266
Score = 27.5 bits (58), Expect = 3.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -1
Query: 333 AFMAEDTTIDTFHCFLTVAKTGTF----SRSSWLDTTEFALALTTPWDLLGLFDILIKPS 166
AF+ + I T F+T G F + S W+ + L L L+ LF +++KP
Sbjct: 57 AFLRKVYAILTAQLFVTSLFGGIFYLHPAFSFWVQMHPWFLILNFFISLVVLFGLIMKPY 116
Query: 165 GHPVSLLFFF 136
+P + +F F
Sbjct: 117 SYPRNYIFLF 126
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = +3
Query: 747 PXPXAPPPPXXRPFXPPXHXLPPTPXRXXP--PLP--PXXPXSPXP 872
P P PP P P PP P P PLP P P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 762 PPPPXXRPFXPPXHXLP--PTPXRXXPPLPPXXPXSPXPP 875
P P +P PP LP P P R L P P PP
Sbjct: 42 PAPVSKKPLPPPTRRLPRKPLPFR-STSLQPPSSQPPAPP 80
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,322,439
Number of Sequences: 5004
Number of extensions: 39855
Number of successful extensions: 231
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 509282430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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