Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_G06
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock prot...    45   9e-05
AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock pr...    44   2e-04
M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C. el...    43   4e-04
AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical...    32   0.52 
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...    32   0.69 
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...    32   0.69 
Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical pr...    32   0.69 
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...    31   1.6  
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...    31   1.6  
Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    29   3.7  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   3.7  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   3.7  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   4.8  
Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical pr...    28   8.5  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock protein
           protein 3 protein.
          Length = 661

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 29/62 (46%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +2

Query: 293 GXVIXIDLGTXYSCVXVYKMDVXKSLP-*PGNRLXPS*RG-PXPHGXPLIGDAAXKPLTN 466
           G +I IDLGT YSCV VYK    + +    GNR+ PS        G  LIGDAA   LT 
Sbjct: 33  GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTI 92

Query: 467 QP 472
            P
Sbjct: 93  NP 94


>AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock
           protein protein 4 protein.
          Length = 657

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +2

Query: 290 IGXVIXIDLGTXYSCVXVYKMDVXKSLP-*PGNRLXPS*RG-PXPHGXPLIGDAAXKPLT 463
           +G +I IDLGT YSCV V+K    + +    GNR+ PS        G  LIGDAA   LT
Sbjct: 29  MGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLT 88

Query: 464 NQP 472
             P
Sbjct: 89  INP 91


>M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C.
           elegans BiP (hsp3)gene, complete cds. ).
          Length = 661

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +2

Query: 299 VIXIDLGTXYSCVXVYKMDVXKSLP-*PGNRLXPS*RG-PXPHGXPLIGDAAXKPLTNQP 472
           +I IDLGT YSCV VYK    + +    GNR+ PS        G  LIGDAA   LT  P
Sbjct: 35  IIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94


>AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.14 protein.
          Length = 555

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
 Frame = +3

Query: 543 PTXXXXSSPXQGPXXKXHXTPXXPTSK-LSQRPTNXXXPPQPXPPPXXXPPKXHGKP 710
           PT    S+P   P    + T      K LS +P      P P PPP   PP    +P
Sbjct: 265 PTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQPPRRTPQPHPKPPPPPPPPIHEAQP 321


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 302 IXIDLGTXYSCVXVYKMDVXKSLP-*PGNRLXPS*RGPXPHGXPLIGDAAXKPLTNQP 472
           I IDLGT YSCV +Y+    + L    GN+  PS          L+GDAA       P
Sbjct: 7   IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPS-YVAFTDTERLVGDAAKDQAARNP 63


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 302 IXIDLGTXYSCVXVYKMDVXKSLP-*PGNRLXPS*RGPXPHGXPLIGDAAXKPLTNQP 472
           I IDLGT YSCV +Y+    + L    GN+  PS          L+GDAA       P
Sbjct: 7   IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPS-YVAFTDTERLVGDAAKDQAARNP 63


>Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical
           protein C12C8.1 protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 302 IXIDLGTXYSCVXVYKMDVXKSLP-*PGNRLXPS*RGPXPHGXPLIGDAAXKPLTNQP 472
           I IDLGT YSCV +Y+    + L    GN+  PS          L+GDAA       P
Sbjct: 7   IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPS-YVAFTDTERLVGDAAKDQAARNP 63


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical
           protein C50F7.5 protein.
          Length = 309

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/62 (25%), Positives = 20/62 (32%)
 Frame = +3

Query: 540 GPTXXXXSSPXQGPXXKXHXTPXXPTSKLSQRPTNXXXPPQPXPPPXXXPPKXHGKPRXX 719
           GP       P + P      +P          P++   PP P  PP   PP   G P   
Sbjct: 208 GPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRR 267

Query: 720 XP 725
            P
Sbjct: 268 PP 269


>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +2

Query: 302 IXIDLGTXYSCVXVY---KMDVXKSLP*PGNRLXPS*RGPXPHGXPLIGDAAXKPLTNQP 472
           + IDLGT YSCV V+   K+++  +    GNR  PS          LIGDAA   +   P
Sbjct: 7   VGIDLGTTYSCVGVFMHGKVEIIAN--DQGNRTTPS-YVAFTDTERLIGDAAKNQVAMNP 63


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +2

Query: 302 IXIDLGTXYSCVXVY---KMDVXKSLP*PGNRLXPS*RGPXPHGXPLIGDAAXKPLTNQP 472
           + IDLGT YSCV V+   K+++  +    GNR  PS          LIGDAA   +   P
Sbjct: 7   VGIDLGTTYSCVGVFMHGKVEIIAN--DQGNRTTPS-YVAFTDTERLIGDAAKNQVAMNP 63


>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +3

Query: 600 TPXXPTSKLSQRPTNXXXPPQPXPPPXXXPP 692
           TP    +    RPT    PP   PPP   PP
Sbjct: 224 TPAPTLAPFRPRPTTRRLPPPTTPPPPPPPP 254


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +3

Query: 600 TPXXPTSKLSQRPTNXXXPPQPXPPPXXXPP 692
           TP    +    RPT    PP   PPP   PP
Sbjct: 222 TPAPTLAPFRPRPTTRRLPPPTTPPPPPPPP 252


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/78 (24%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
 Frame = +3

Query: 495 PXPXXLVLELAXXXXGPTXXXXSSPXQGPXXKXHXTPXXPTSKLSQRP-TNXXXPPQPXP 671
           P P      +A     P      +P   P       P  P       P ++   PP P P
Sbjct: 577 PPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPP 636

Query: 672 PPXXXPPKXHGKPRXXXP 725
           PP   P    G P    P
Sbjct: 637 PPMGLPAVGAGAPPPPPP 654


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/78 (24%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
 Frame = +3

Query: 495 PXPXXLVLELAXXXXGPTXXXXSSPXQGPXXKXHXTPXXPTSKLSQRP-TNXXXPPQPXP 671
           P P      +A     P      +P   P       P  P       P ++   PP P P
Sbjct: 403 PPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPP 462

Query: 672 PPXXXPPKXHGKPRXXXP 725
           PP   P    G P    P
Sbjct: 463 PPMGLPAVGAGAPPPPPP 480


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 654 PPQPXPPPXXXPPKXHGKPRXXXP 725
           PP P PPP   PP  H  P    P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPPAP 155


>Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical
           protein F36H1.3 protein.
          Length = 597

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/50 (34%), Positives = 19/50 (38%)
 Frame = +1

Query: 634 GXQTXXXPXNXTXXPXXXHPXPTXNPGXXXPXEKXGTPTPXXSPRPXXFS 783
           G Q    P +    P    P P   P    P EK  TP+P  SP P   S
Sbjct: 491 GAQPSSAPVHTPPAPPAI-PSPAKLPTAPPPVEKPVTPSPSASPLPSPVS 539


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/51 (33%), Positives = 20/51 (39%)
 Frame = +3

Query: 561 SSPXQGPXXKXHXTPXXPTSKLSQRPTNXXXPPQPXPPPXXXPPKXHGKPR 713
           SSP   P  +   TP  P S   +RP      PQ  PP     P+    PR
Sbjct: 136 SSPPPPPPPRVPRTPP-PRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPR 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,920,446
Number of Sequences: 27780
Number of extensions: 278321
Number of successful extensions: 1914
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)