Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_G03
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       24   4.2  
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856...    29   5.0  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 886 PPPPPPXRG 860
           PPPPPP +G
Sbjct: 353 PPPPPPPKG 361



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 883 PPPPPXRGGXXKKXKXXG 830
           PPPPP +GG  +     G
Sbjct: 377 PPPPPPKGGASRPPAAPG 394


>03_03_0038 +
           13984525-13984917,13985351-13985429,13985535-13985628,
           13985712-13985844
          Length = 232

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 886 PPPPPPXRGGXXKKXK 839
           PPPPP  RGG  KK K
Sbjct: 40  PPPPPQLRGGETKKKK 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,645,792
Number of Sequences: 37544
Number of extensions: 166418
Number of successful extensions: 3107
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2937
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)