Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F21
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0241 - 19332540-19332635,19332931-19333023,19333743-193337...    32   0.74 

>05_04_0241 -
           19332540-19332635,19332931-19333023,19333743-19333790,
           19333907-19333999
          Length = 109

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 127 MSLWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGK 270
           M LW  L R V +R + +   V  G F  ER  +     ++E  N G+
Sbjct: 1   MGLWDALYRVVMRRNAVYVTFVVAGAFAGERAVDYGVHKVWEMNNIGE 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,968,758
Number of Sequences: 37544
Number of extensions: 126404
Number of successful extensions: 287
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)