Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F18
         (909 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095084-1|AAM11412.1|  133|Drosophila melanogaster RE49709p pro...   105   8e-23
AY071722-1|AAL49344.1|  133|Drosophila melanogaster RH38554p pro...   105   8e-23
AE014297-4356|AAF56878.1|  133|Drosophila melanogaster CG1458-PA...   105   8e-23
AE013599-1870|AAF58263.1|  559|Drosophila melanogaster CG8589-PA...    30   5.0  

>AY095084-1|AAM11412.1|  133|Drosophila melanogaster RE49709p
           protein.
          Length = 133

 Score =  105 bits (252), Expect = 8e-23
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = +3

Query: 294 IRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 461
           IRK+  KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TGDN GP+V++
Sbjct: 77  IRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIK 132



 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = +2

Query: 80  MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 259
           M  +S+LVK ++PNYLSSLP+PDS+GGWF+L  KDWLALIPPTVVV G+ Y +Y     A
Sbjct: 1   MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60

Query: 260 REAGSGQIN 286
             A     N
Sbjct: 61  ARASCAAKN 69


>AY071722-1|AAL49344.1|  133|Drosophila melanogaster RH38554p
           protein.
          Length = 133

 Score =  105 bits (252), Expect = 8e-23
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = +3

Query: 294 IRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 461
           IRK+  KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TGDN GP+V++
Sbjct: 77  IRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIK 132



 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = +2

Query: 80  MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 259
           M  +S+LVK ++PNYLSSLP+PDS+GGWF+L  KDWLALIPPTVVV G+ Y +Y     A
Sbjct: 1   MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60

Query: 260 REAGSGQIN 286
             A     N
Sbjct: 61  ARASCAAKN 69


>AE014297-4356|AAF56878.1|  133|Drosophila melanogaster CG1458-PA
           protein.
          Length = 133

 Score =  105 bits (252), Expect = 8e-23
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = +3

Query: 294 IRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 461
           IRK+  KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK+TGDN GP+V++
Sbjct: 77  IRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIK 132



 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = +2

Query: 80  MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 259
           M  +S+LVK ++PNYLSSLP+PDS+GGWF+L  KDWLALIPPTVVV G+ Y +Y     A
Sbjct: 1   MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60

Query: 260 REAGSGQIN 286
             A     N
Sbjct: 61  ARASCAAKN 69


>AE013599-1870|AAF58263.1|  559|Drosophila melanogaster CG8589-PA
           protein.
          Length = 559

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 368 SAKGCLLSYI-LNVNKVHNFINVLPDTKGLFDHCQLLWL-FLLSGKSSKIYR 219
           S +GC L Y  L      +F+  +PDT  +  H Q+ W+  + + KS+ I +
Sbjct: 36  SEEGCTLPYSKLGFKDAESFLRSIPDTVTVTGHGQMAWITAVATAKSAHIQK 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,016,997
Number of Sequences: 53049
Number of extensions: 709861
Number of successful extensions: 1513
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)