Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F18
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical p...   100   2e-21
Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical p...   100   2e-21
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...   100   2e-21
Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical pr...    34   0.12 
U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical pr...    33   0.37 
U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical
           protein W02B12.15b protein.
          Length = 134

 Score =  100 bits (239), Expect = 2e-21
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = +3

Query: 294 IRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 461
           I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP++V+
Sbjct: 75  IQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPLIVK 130


>Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical
           protein W02B12.15a protein.
          Length = 103

 Score =  100 bits (239), Expect = 2e-21
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = +3

Query: 294 IRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 461
           I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP++V+
Sbjct: 44  IQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPLIVK 99


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score =  100 bits (239), Expect = 2e-21
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = +3

Query: 294 IRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVR 461
           I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP++V+
Sbjct: 75  IQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPLIVK 130


>Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical
           protein M88.7 protein.
          Length = 160

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 312 KVVDFIDIEDITEKASLCRCWRSKNWPYCDGSH 410
           K V FI  +D+T    LC C ++ N P+CDGSH
Sbjct: 116 KPVRFIPDKDMT--VWLCNCKQTNNRPFCDGSH 146


>U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical
           protein ZC204.10 protein.
          Length = 238

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +1

Query: 577 LRKCLKRNALYNIISVLFISYKTTRIL 657
           LRKCLKR ++  +IS+ F+S KT  I+
Sbjct: 16  LRKCLKRMSVAQLISISFLSKKTKEII 42


>U80839-9|AAB37922.2|  302|Caenorhabditis elegans Hypothetical
           protein ZC204.7 protein.
          Length = 302

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 577 LRKCLKRNALYNIISVLFISYKTTRIL 657
           L+KCLK+ ++  +IS+ F+S  TT I+
Sbjct: 16  LQKCLKQMSVAQLISISFLSKNTTEII 42


>Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical
           protein F57A8.5 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 111 PFPTICRACRFQILLADGFVLEL 179
           P+P  C++CRFQ  L  G  LE+
Sbjct: 65  PYPLKCQSCRFQRCLDAGMYLEV 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,631,995
Number of Sequences: 27780
Number of extensions: 381315
Number of successful extensions: 897
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)