Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_F17
(922 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.6
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 28 2.1
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 28 2.1
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 28 2.1
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 2.1
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom... 27 3.7
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 6.5
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 8.6
SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces po... 26 8.6
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 8.6
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -2
Query: 618 PSAEQKQSGRTHWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQANLP 439
PS+ S + S S + SSS+ + SS SS S ++S S S +P +
Sbjct: 155 PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSST 214
Query: 438 SGQIGSS 418
S SS
Sbjct: 215 SSSHSSS 221
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 197 YRRTTDQRSAHLQLRRHL--VASHEKYCIPANQ 105
+ RTT AHLQ R+L +A E+ IP NQ
Sbjct: 1226 FPRTTQDNRAHLQAARNLWALAVEERCIIPRNQ 1258
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 462 PLPQANLPSGQIGSSVFKIG 403
P+P+A LPS IG VF IG
Sbjct: 380 PVPEARLPSMMIGCIVFPIG 399
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -2
Query: 621 VPSAEQKQSGR---THWLGSQSGALFGSSSTVQAFSSDSSLQSGLPLQNNSFSMQSPLPQ 451
+PS E+ S R T + + G + + S D++LQS PL+ +S +
Sbjct: 498 LPSVEEDSSNRDKKTDIADLHTDSKVGIADVLSPISPDAALQSDGPLKKAKEPEESSITP 557
Query: 450 ANLPSGQIGSSV 415
PS +G S+
Sbjct: 558 TTPPSFNVGESL 569
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 497 KPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIEPNQVPQ 661
+P D A DP++ P+ +P+ A + G+ P +VP+
Sbjct: 243 RPHPSDTIPPGASMARSDPSQVPESNPSAAAAVAAAAVAAAANLTNGVNPPEVPR 297
>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 161 QLRRHLVASHEKYCIPANQLITHRDTETRVEPWRSAKTQNLKEFPIVRS 15
+L H+V +++Y + L T RD E V+P R K + L VRS
Sbjct: 112 ELEEHMVDRYDQYRV---SLKTIRDIEASVQPTRVKKEKLLNSIYDVRS 157
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -2
Query: 525 SSDSSLQSGLPLQNNSFSMQSPLPQANLPSGQIGSSVFKIGKTFRGF 385
+S LQ P+Q+++F+ +P P +P I ++ +G ++ F
Sbjct: 271 ASADRLQKNHPVQSSNFNPYTPAPSITVPPNYIPNTAM-MGPSYSSF 316
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 492 LQNNSFSMQSPLPQANLPS-GQIGSSVFK 409
L+ NSF + P+P ++PS I S VFK
Sbjct: 305 LKKNSFCLYLPIPLTSIPSTPSIRSHVFK 333
>SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 587 VLPDCFCSADGTRIPGGIEPNQVPQMVTITFNGAVNVDNIXLYEQIFNGNRHNPN 751
+LP T PG ++ VP + I F+GA N + + N R N
Sbjct: 258 MLPHVQNGVKNTSWPGRLDIRSVPSLGDILFDGAHNKEAAIELAKFVNSQRREHN 312
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 509 KDESDENACTVELDPNRAPDCDPNQCVLPDCFCSAD 616
K +SD VELD + DP+ VLP+ ++D
Sbjct: 295 KSKSDRRKRLVELDAENENENDPSDFVLPNGQSNSD 330
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,322,389
Number of Sequences: 5004
Number of extensions: 66783
Number of successful extensions: 227
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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