Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F15
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    33   0.27 
AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical ...    28   7.7  

>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
           protein B0207.5 protein.
          Length = 3279

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 13/108 (12%)
 Frame = +2

Query: 23  YREFLKICHCVLKICK--NSKPRSYLKYEYFKT------FLCFYCGNVSGVM-----*YS 163
           YR F K+C    + C+  N K  S   YE F++      F C   GNV  +       Y 
Sbjct: 419 YRRFEKVCLKDTQDCRNVNMKDHSDEDYEKFRSDCVRREFNCDSVGNVDQLSEDEYNDYK 478

Query: 164 RSSKNTYQGH*DCRKGSR*RSKSHQYRQYSQRCFQFLETEEKKALRKE 307
           +  K  ++G  DC +    +   H+ ++Y  +C  F   E K  L K+
Sbjct: 479 KRCKVNFEGD-DCDEIRVDKLSDHKLQEYVNKCGLFCGIERKNVLTKK 525


>AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.2 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 362 LYIIVIDPLVIYLIP-FTQFLFLMLSFLRFQEIEN 261
           L I++  P+++Y +P +TQF+F    FL F+ + N
Sbjct: 21  LSIVIFLPILVYFLPRYTQFIF----FLNFRRLPN 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,087,499
Number of Sequences: 27780
Number of extensions: 287542
Number of successful extensions: 630
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)