Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F12
         (940 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z92793-2|CAD56589.1|  684|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z92793-1|CAB07229.1|  681|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z72503-11|CAD56560.1|  684|Caenorhabditis elegans Hypothetical p...    28   8.4  
Z72503-10|CAA96601.1|  681|Caenorhabditis elegans Hypothetical p...    28   8.4  
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical
           protein F14F3.3 protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 222 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGMLPRGETFVHTNELQME 398
           I+ PT      ++    NIE S D  +N+D+ K +F + ++ GM     +      L + 
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331

Query: 399 EAVKVFRV 422
             VKV RV
Sbjct: 332 SRVKVMRV 339


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 464 RSPHENIEVLSVVEDSEDFD 405
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>Z92793-2|CAD56589.1|  684|Caenorhabditis elegans Hypothetical
           protein C26C6.5b protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +1

Query: 550 STCPLLTRSIPTSSLTXMSSVKPL**R*LKPPTHPGSSGNTTASRLLTTI 699
           +  P  +++IPTSS   +SS+ PL  R  + P+  GSS  T A +  T I
Sbjct: 522 AAAPATSQTIPTSSTATVSSI-PLVPRLPQIPSSTGSSTPTQAVKTSTPI 570


>Z92793-1|CAB07229.1|  681|Caenorhabditis elegans Hypothetical
           protein C26C6.5a protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +1

Query: 550 STCPLLTRSIPTSSLTXMSSVKPL**R*LKPPTHPGSSGNTTASRLLTTI 699
           +  P  +++IPTSS   +SS+ PL  R  + P+  GSS  T A +  T I
Sbjct: 519 AAAPATSQTIPTSSTATVSSI-PLVPRLPQIPSSTGSSTPTQAVKTSTPI 567


>Z72503-11|CAD56560.1|  684|Caenorhabditis elegans Hypothetical
           protein C26C6.5b protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +1

Query: 550 STCPLLTRSIPTSSLTXMSSVKPL**R*LKPPTHPGSSGNTTASRLLTTI 699
           +  P  +++IPTSS   +SS+ PL  R  + P+  GSS  T A +  T I
Sbjct: 522 AAAPATSQTIPTSSTATVSSI-PLVPRLPQIPSSTGSSTPTQAVKTSTPI 570


>Z72503-10|CAA96601.1|  681|Caenorhabditis elegans Hypothetical
           protein C26C6.5a protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +1

Query: 550 STCPLLTRSIPTSSLTXMSSVKPL**R*LKPPTHPGSSGNTTASRLLTTI 699
           +  P  +++IPTSS   +SS+ PL  R  + P+  GSS  T A +  T I
Sbjct: 519 AAAPATSQTIPTSSTATVSSI-PLVPRLPQIPSSTGSSTPTQAVKTSTPI 567


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +1

Query: 481 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLTXMSSVKPL**R*LKPPTH 651
           G+TE  S+   T      +TEPT   ST    T ++PTS+ T  ++          P T 
Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTT----TTPTTT 312

Query: 652 PGSSGNTTASRLL 690
             ++  TT+  LL
Sbjct: 313 TTTTSTTTSDDLL 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,301,375
Number of Sequences: 27780
Number of extensions: 308167
Number of successful extensions: 751
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)