Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F07
         (854 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    36   0.049
U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    29   5.6  
U21323-8|AAA62552.1|  294|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +3

Query: 135 SMTELVYQAGXLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTS 314
           S+ E VY      PP  G+   F + P  P +    VPP A S F    G +P  T+ T+
Sbjct: 313 SLKEQVYGKPNPPPPSAGY--FFQAPPPAPASSSSTVPP-AVSPFGVPLGAQPSTTSSTT 369

Query: 315 VATN 326
            ++N
Sbjct: 370 YSSN 373


>U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical
           protein EEED8.11 protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +3

Query: 153 YQAGXLRPPG---GGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 323
           Y +G  RPP    GGH N  D   +PP++       ++T T +         T  T+  T
Sbjct: 28  YGSGGHRPPSSYHGGHHNDDDCTTKPPKSTSTPSTSTSTPTTTTTTTTTTTTTPTTTTTT 87

Query: 324 NGQSTPK 344
              +TP+
Sbjct: 88  TTTTTPE 94


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 153 YQAGXLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQG 284
           + AG   PP G       S P PPR G   +PP    +F  G+G
Sbjct: 751 FNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPP--PPSFRGGRG 792


>U21323-8|AAA62552.1|  294|Caenorhabditis elegans Hypothetical
           protein C45G9.9 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 689 ALXK*SMSXCLPTDATIRXVFPPTXTPLXFKNLXPPTWPVSXXYFRPKANS 841
           +L K   S  +  DAT++ V P   TP+    + P   P S   ++P++ S
Sbjct: 97  SLQKPIQSGIVDADATVKTVVPRPPTPIPPTGVKPEPAPRSEPLYQPRSVS 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,445,430
Number of Sequences: 27780
Number of extensions: 307317
Number of successful extensions: 787
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)