Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F04
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   4.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.8  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = +1

Query: 199 FDVIN*VNDYLKTVLLMYLNNF 264
           FDV N VN+Y++ + ++Y+ ++
Sbjct: 162 FDVPNFVNEYVQAIEVLYICSY 183


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 816 RIDQSILTGESVSVIKHTDPIPD 884
           RID S  TG  V    H +P PD
Sbjct: 32  RIDFSNTTGAVVECSAHGNPTPD 54


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 322 EEVLKYFGTDPDKGLSPDQIKRNQEKYGP 408
           EEV + +     KGL  ++IK   +KY P
Sbjct: 18  EEVAQVWEQTLQKGLDTEEIKDLLQKYPP 46


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 768 LSPTDTSTTSPGNNFLG 718
           LSP   S+  PGNN  G
Sbjct: 222 LSPKSASSLPPGNNIHG 238


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 768 LSPTDTSTTSPGNNFLG 718
           LSP   S+  PGNN  G
Sbjct: 170 LSPKSASSLPPGNNIHG 186


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 768 LSPTDTSTTSPGNNFLG 718
           LSP   S+  PGNN  G
Sbjct: 353 LSPKSASSLPPGNNIHG 369


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 785 SPYQNLLHHNP 817
           S +Q +LHHNP
Sbjct: 341 SDHQAMLHHNP 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,590
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)