Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F03
         (920 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2...    69   9e-13
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa...    67   3e-12
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca...    26   8.6  
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac...    26   8.6  

>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 439

 Score = 68.9 bits (161), Expect = 9e-13
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +1

Query: 79  LVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAG 204
           L VG+  GQ+K+GAPCRSERLAKYN++LRIEEELG    YAG
Sbjct: 386 LTVGIGAGQLKSGAPCRSERLAKYNELLRIEEELGSEGVYAG 427


>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 440

 Score = 67.3 bits (157), Expect = 3e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 79  LVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAG 204
           L VGL  GQ+K+GAPCRSERLAKYN++LRIE+ LG +A YAG
Sbjct: 387 LAVGLEAGQMKSGAPCRSERLAKYNELLRIEDNLGDSAIYAG 428


>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
            synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 2410

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -3

Query: 258  TEFYVFLREFLDRSTEVLP--GVFGVDTKFLFNAQNLVV-LGETLRATRGAGLD 106
            + FY  + E   RS+EVLP      +D K    A+ +++    T  A  GA LD
Sbjct: 1630 SSFYSLIHESFSRSSEVLPTSSDTNLDAKRAEEAEMIMIETPPTAEANTGAKLD 1683


>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
           Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 593

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 90  FVHGS-DQDRRPVSLGASRQVQPN 158
           FV GS +Q+RRP+S      +QPN
Sbjct: 519 FVQGSGNQNRRPISFPVISNMQPN 542


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,872,845
Number of Sequences: 5004
Number of extensions: 35576
Number of successful extensions: 92
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)