Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F03
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193...    88   8e-18
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877...    72   6e-13
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877...    58   1e-08
02_05_0500 - 29538409-29539283,29540306-29541641                       38   0.008
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429...    35   0.079
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781...    35   0.079

>06_01_0262 -
           1930552-1930632,1931096-1931152,1931236-1931287,
           1931373-1931461,1931551-1931601,1931696-1931890,
           1932015-1932095,1932205-1932267,1933045-1933119,
           1933194-1933352,1933353-1933463,1933536-1933616,
           1933721-1933807,1933920-1933967,1934357-1934421,
           1935002-1935065,1935220-1935288
          Length = 475

 Score = 88.2 bits (209), Expect = 8e-18
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = +1

Query: 70  LPDLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFRRPV 225
           + DL VGLSTGQIKTGAPCRSERLAKYNQ+LRIEEELG  A YAG+ FR PV
Sbjct: 421 IADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGEKFRAPV 472


>03_02_0477 -
           8770905-8770985,8771164-8771361,8771939-8772025,
           8772094-8772179,8772270-8772368,8772431-8772551,
           8773251-8773331,8773643-8773723,8773972-8774088,
           8774185-8774256,8774621-8775055
          Length = 485

 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 32/49 (65%), Positives = 39/49 (79%)
 Frame = +1

Query: 70  LPDLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEELGVNAKYAGKNFR 216
           + DL VG + GQIK GAPCR E L+KYNQ+LRIEEELG +  YAG+N+R
Sbjct: 431 IADLAVGAAAGQIKAGAPCRGECLSKYNQLLRIEEELGSDGVYAGENWR 479


>09_03_0117 -
           12486672-12486818,12487438-12487488,12487583-12487729,
           12488037-12488354,12488450-12488604,12488941-12489248,
           12490644-12491038
          Length = 506

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +1

Query: 70  LPDLVVGLSTGQIKTGAPCRSERLAKYNQIL 162
           + DL VGL++GQIKTGAPCRSERLAKYNQI+
Sbjct: 430 IADLAVGLASGQIKTGAPCRSERLAKYNQIV 460


>02_05_0500 - 29538409-29539283,29540306-29541641
          Length = 736

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 197 YLALTPSSSSMRRIWLYLARRSERH-GAPVLI*PVDKPTTRSGNKGIFG 54
           Y      + + R +W+Y+A+   R    PVL  P+D  T   GNKG FG
Sbjct: 226 YFVWVDYNGTSRHVWVYMAKNDTRKPSTPVLDAPLDLSTVLRGNKGYFG 274


>10_02_0022 -
           4290708-4290788,4291254-4291305,4291396-4291484,
           4291565-4291615,4291699-4291893,4292010-4292090,
           4292190-4292252,4292480-4292554,4292630-4292710,
           4292784-4292888,4292977-4293057,4293156-4293242,
           4293322-4293369,4293923-4293987,4294109-4294172,
           4294828-4294896
          Length = 428

 Score = 35.1 bits (77), Expect = 0.079
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +1

Query: 157 ILRIEEELGVNAKYAGKNFRRPV 225
           +LRIEEELG  A YAG  FR PV
Sbjct: 403 LLRIEEELGAAAVYAGAKFRAPV 425


>03_02_0365 -
           7816966-7817046,7817441-7817492,7817590-7817678,
           7817762-7817854,7817900-7818094,7818172-7818249,
           7818353-7818415,7818806-7818880,7818958-7819038,
           7819329-7819409,7819516-7819602,7819682-7819729,
           7820317-7820381,7820566-7820629,7821254-7821322
          Length = 406

 Score = 35.1 bits (77), Expect = 0.079
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +1

Query: 157 ILRIEEELGVNAKYAGKNFRRPV 225
           +LRIEEELG  A YAG  FR PV
Sbjct: 381 LLRIEEELGAAAVYAGAKFRAPV 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,614,370
Number of Sequences: 37544
Number of extensions: 215360
Number of successful extensions: 465
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)