Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_F01
         (959 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    31   1.4  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   9.6  
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835...    28   9.6  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 522  QPPLPGSXPPXXXPXPPXFXP 584
            QPPLP S PP   P PP   P
Sbjct: 1157 QPPLPPSPPPATPPPPPPLSP 1177


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +1

Query: 493 PXXXPPASLXNXXSPAXPPHXXPLXPXXSPPP 588
           P   PP    N   P  PP   P  P  +PPP
Sbjct: 92  PPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPP 123


>05_07_0236 -
           28582157-28582552,28582639-28582911,28583324-28583560,
           28583653-28583694,28583782-28583964,28584393-28584524,
           28585605-28586057
          Length = 571

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 493 PXXXPPASLXNXXSPAXPPHXXPLXPXXSPP 585
           P   PP+S      P+ PP   PL P   PP
Sbjct: 95  PTMPPPSSGSGHTLPSPPPPLPPLLPPPQPP 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,405,425
Number of Sequences: 37544
Number of extensions: 131666
Number of successful extensions: 805
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)