Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_E23
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          214   1e-55
11_01_0155 - 1287003-1287452                                          214   1e-55
03_06_0097 - 31632238-31632525,31633386-31633769                       43   3e-04
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    38   0.009
01_05_0500 + 22752190-22752329,22752957-22753032,22753292-227533...    29   7.0  
02_05_1340 + 35797923-35799881                                         28   9.2  

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  214 bits (522), Expect = 1e-55
 Identities = 95/143 (66%), Positives = 119/143 (83%)
 Frame = +1

Query: 100 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 279
           R P   VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 280 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 459
             +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 460 PRRCEPKKFGGPGARARYQKSYR 528
           PRRCEPKKFGG GARAR+QKSYR
Sbjct: 127 PRRCEPKKFGGRGARARFQKSYR 149


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  214 bits (522), Expect = 1e-55
 Identities = 95/143 (66%), Positives = 119/143 (83%)
 Frame = +1

Query: 100 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 279
           R P   VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 280 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 459
             +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 460 PRRCEPKKFGGPGARARYQKSYR 528
           PRRCEPKKFGG GARAR+QKSYR
Sbjct: 127 PRRCEPKKFGGRGARARFQKSYR 149


>03_06_0097 - 31632238-31632525,31633386-31633769
          Length = 223

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
 Frame = +1

Query: 112 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 282
           Q +   GR+KTA A    + G G + +N R         P  ++Y  + P++ LG E  +
Sbjct: 96  QRITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEY-CKVPLVTLGFE--N 152

Query: 283 MVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADP 462
             D+ V V GGG   Q  AI   +++AL+      +  A+K  ++         LL  D 
Sbjct: 153 SYDVFVKVHGGGLSGQAQAICLGVARALVK-----ISTANKVTLR------GEGLLTRDT 201

Query: 463 RRCEPKKFGGPGARARYQKSYR 528
           R  E KK G   AR R Q S R
Sbjct: 202 RIVERKKAGLKKARKRPQFSKR 223


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 38.3 bits (85), Expect = 0.009
 Identities = 26/79 (32%), Positives = 38/79 (48%)
 Frame = +1

Query: 130 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 309
           G++K + A  + + G G   VN +  D   P +L ++          +     D+  TVK
Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353

Query: 310 GGGHVAQVYAIRQAISKAL 366
           GGG   QV AIR  IS+AL
Sbjct: 354 GGGVSGQVGAIRLGISRAL 372


>01_05_0500 +
           22752190-22752329,22752957-22753032,22753292-22753351,
           22754718-22754882,22756299-22756358
          Length = 166

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 204 WTAVYTQHSMTTLAIRNCGGGFLTSEYLD 118
           W  V T H +T +A R+C G F   ++LD
Sbjct: 18  WNYVVTAHKLTVVA-RSCVGNFTAPDHLD 45


>02_05_1340 + 35797923-35799881
          Length = 652

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 277 IFPCRAKGLALEVCTAAVW 221
           IFP R +GL + +C+ A W
Sbjct: 560 IFPTRVRGLCIAICSLAFW 578


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,923,525
Number of Sequences: 37544
Number of extensions: 420254
Number of successful extensions: 1273
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)