Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_E23
         (932 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical pr...   225   3e-59
AL132876-11|CAC48133.1|  325|Caenorhabditis elegans Hypothetical...    32   0.51 
Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z11115-14|CAC42391.1|  644|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z11115-13|CAA77454.2|  642|Caenorhabditis elegans Hypothetical p...    28   8.3  
AF269694-1|AAF76193.1|  642|Caenorhabditis elegans LIN-9S protein.     28   8.3  
AF269693-1|AAF76192.1|  644|Caenorhabditis elegans LIN-9L protein.     28   8.3  
AF039050-2|AAC47935.1|  499|Caenorhabditis elegans Cytochrome p4...    28   8.3  

>Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical
           protein T01C3.6 protein.
          Length = 144

 Score =  225 bits (551), Expect = 3e-59
 Identities = 99/140 (70%), Positives = 125/140 (89%)
 Frame = +1

Query: 109 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 288
           +Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F  V
Sbjct: 5   VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64

Query: 289 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 468
           DIR+ V GGGHVAQ+YA+RQA++KAL+A+Y KYVDE SK+E+K+I   YD+SLLVADPRR
Sbjct: 65  DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRR 124

Query: 469 CEPKKFGGPGARARYQKSYR 528
            E KKFGGPGARARYQKSYR
Sbjct: 125 RESKKFGGPGARARYQKSYR 144


>AL132876-11|CAC48133.1|  325|Caenorhabditis elegans Hypothetical
           protein Y105E8A.13 protein.
          Length = 325

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = -3

Query: 129 EYLDGLDGLTSCLLHSSHFDRERLIECKNLK 37
           E L+ +D + SC+L++SH+D E LIE KN K
Sbjct: 41  EQLELIDHVYSCILNTSHYD-ESLIEKKNSK 70


>Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical
           protein BE10.4 protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 385 YVDEASKKEIKDILVQYDRSLLVADPRRCE 474
           + DE  +KE+ D+  QYDRS+ + D  R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180


>Z73898-9|CAA98066.2|  913|Caenorhabditis elegans Hypothetical
           protein ZK822.1 protein.
          Length = 913

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = +1

Query: 31  EFLKIFAFNQSFSVKMAAVQEAR 99
           EFLK+F++++ FS+++AA  E R
Sbjct: 613 EFLKLFSYSKDFSMELAAPPERR 635


>Z11115-14|CAC42391.1|  644|Caenorhabditis elegans Hypothetical
           protein ZK637.7b protein.
          Length = 644

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 29/107 (27%), Positives = 53/107 (49%)
 Frame = +1

Query: 112 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 291
           +AV+    ++    V +C +G  +  V+   L L++  L    LQ  +  +G +K S VD
Sbjct: 538 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 592

Query: 292 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 432
           ++     G  +++   IR AI    +AF+Q YV E   K+   I+++
Sbjct: 593 LQSL---GDAISE---IRTAIHPRNVAFFQDYV-EVHMKQFHTIMLE 632


>Z11115-13|CAA77454.2|  642|Caenorhabditis elegans Hypothetical
           protein ZK637.7a protein.
          Length = 642

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 29/107 (27%), Positives = 53/107 (49%)
 Frame = +1

Query: 112 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 291
           +AV+    ++    V +C +G  +  V+   L L++  L    LQ  +  +G +K S VD
Sbjct: 536 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 590

Query: 292 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 432
           ++     G  +++   IR AI    +AF+Q YV E   K+   I+++
Sbjct: 591 LQSL---GDAISE---IRTAIHPRNVAFFQDYV-EVHMKQFHTIMLE 630


>AF269694-1|AAF76193.1|  642|Caenorhabditis elegans LIN-9S protein.
          Length = 642

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 29/107 (27%), Positives = 53/107 (49%)
 Frame = +1

Query: 112 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 291
           +AV+    ++    V +C +G  +  V+   L L++  L    LQ  +  +G +K S VD
Sbjct: 536 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 590

Query: 292 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 432
           ++     G  +++   IR AI    +AF+Q YV E   K+   I+++
Sbjct: 591 LQSL---GDAISE---IRTAIHPRNVAFFQDYV-EVHMKQFHTIMLE 630


>AF269693-1|AAF76192.1|  644|Caenorhabditis elegans LIN-9L protein.
          Length = 644

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 29/107 (27%), Positives = 53/107 (49%)
 Frame = +1

Query: 112 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVD 291
           +AV+    ++    V +C +G  +  V+   L L++  L    LQ  +  +G +K S VD
Sbjct: 538 EAVRQMCSQQAGRFVEHCNQGLNVENVHA--LTLIQS-LTAVLLQ--VRTMGTQKISAVD 592

Query: 292 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 432
           ++     G  +++   IR AI    +AF+Q YV E   K+   I+++
Sbjct: 593 LQSL---GDAISE---IRTAIHPRNVAFFQDYV-EVHMKQFHTIMLE 632


>AF039050-2|AAC47935.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 34A5 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +1

Query: 13  YRPHYREFLKIFAFNQSFSVKMAAVQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRV 192
           ++ HY +F  ++ F     V +A    A    ++   VFG + T   + Y + G G++  
Sbjct: 58  FKKHYGKFFTLW-FGPIPIVFIADYDIAYETHVKRANVFGHRFTIGGMDYIREGRGIVGS 116

Query: 193 NG 198
           NG
Sbjct: 117 NG 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,924,323
Number of Sequences: 27780
Number of extensions: 320868
Number of successful extensions: 822
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)